HHsearch alignment for GI: 254780605 and conserved domain: cd01088
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.76 E-value=6.1e-17 Score=137.96 Aligned_cols=191 Identities=18% Similarity=0.167 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98799998443899999987533210012453018899999998754330278555541000012335432222455433
Q gi|254780605|r 319 IEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQS 398 (609)
Q Consensus 319 I~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s 398 (609)
T Consensus 1 l~kyr~Ag----~i~~~vl~~~~~~~kpG~s~~el~~~~e~~i~~~~a-------~~aFP~~i--SvN~~v~H~~P~~~d 67 (291)
T cd01088 1 LEKYREAG----EIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGA-------GPAFPVNL--SINECAAHYTPNAGD 67 (291)
T ss_pred CHHHHHHH----HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC-------CCCCCCEE--CCCCEEECCCCCCCC
T ss_conf 96899999----999999999996676999599999999999998598-------06778622--454677568899887
Q ss_pred CEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 20503898799830320105612221432103788888433366778888899721789788889999873667741865
Q gi|254780605|r 399 NRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD 478 (609)
Q Consensus 399 ~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d 478 (609)
T Consensus 68 ~~~lk~GDiVkiD~G~~idG~~~D~A~Tv~v~~~~~~Li~aa~~al~~--ai~~~k--pG~~~~dIg~~Ie~~~~~~g~~ 143 (291)
T cd01088 68 DTVLKEGDVVKLDFGAHVDGYIADSAFTVDFDPKYDDLLEAAKEALNA--AIKEAG--PDVRLGEIGEAIEEVIESYGFK 143 (291)
T ss_pred CEEECCCCEEEEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHH--HHHHHC--CCCCHHHHHHHHHHHHHHCCCE
T ss_conf 546337998998665787788868889996383177899999999999--999853--8989899999999999986977
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCC---CCCCCEECCCCEEEECCCEEECCCCCEE
Q ss_conf 47-764323211356077886237---7898600569878846860356875215
Q gi|254780605|r 479 FA-HGVGHGVGSFLPVHEGPQGIS---RTNQEPLLPGMILSNEPGYYRCGAFGIR 529 (609)
Q Consensus 479 y~-HgtGHGVG~~l~VHE~P~~is---~~~~~~l~~Gmv~s~EPG~Y~~g~~GiR 529 (609)
T Consensus 144 ~v~~l~GH~i~ry-~ih~~~~-Ipn~~~~~~~~l~~g~v~aIEp~~t-~G~g~v~ 195 (291)
T cd01088 144 PIRNLTGHSIERY-RLHAGKS-IPNVKGGEGTRLEEGDVYAIEPFAT-TGKGYVH 195 (291)
T ss_pred EECCCCCCCCCCC-CCCCCCE-ECEECCCCCCEECCCCEEEEEEEEE-CCCCEEE
T ss_conf 0036525577772-2169975-3425289983660686899855740-5875263