HHsearch alignment for GI: 254780605 and conserved domain: cd01088

>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.76  E-value=6.1e-17  Score=137.96  Aligned_cols=191  Identities=18%  Similarity=0.167  Sum_probs=136.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98799998443899999987533210012453018899999998754330278555541000012335432222455433
Q gi|254780605|r  319 IEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQS  398 (609)
Q Consensus       319 I~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s  398 (609)
T Consensus         1 l~kyr~Ag----~i~~~vl~~~~~~~kpG~s~~el~~~~e~~i~~~~a-------~~aFP~~i--SvN~~v~H~~P~~~d   67 (291)
T cd01088           1 LEKYREAG----EIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGA-------GPAFPVNL--SINECAAHYTPNAGD   67 (291)
T ss_pred             CHHHHHHH----HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC-------CCCCCCEE--CCCCEEECCCCCCCC
T ss_conf             96899999----999999999996676999599999999999998598-------06778622--454677568899887


Q ss_pred             CEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             20503898799830320105612221432103788888433366778888899721789788889999873667741865
Q gi|254780605|r  399 NRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD  478 (609)
Q Consensus       399 ~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d  478 (609)
T Consensus        68 ~~~lk~GDiVkiD~G~~idG~~~D~A~Tv~v~~~~~~Li~aa~~al~~--ai~~~k--pG~~~~dIg~~Ie~~~~~~g~~  143 (291)
T cd01088          68 DTVLKEGDVVKLDFGAHVDGYIADSAFTVDFDPKYDDLLEAAKEALNA--AIKEAG--PDVRLGEIGEAIEEVIESYGFK  143 (291)
T ss_pred             CEEECCCCEEEEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHH--HHHHHC--CCCCHHHHHHHHHHHHHHCCCE
T ss_conf             546337998998665787788868889996383177899999999999--999853--8989899999999999986977


Q ss_pred             CC-CCCCCCCCCCCCCCCCCCCCC---CCCCCEECCCCEEEECCCEEECCCCCEE
Q ss_conf             47-764323211356077886237---7898600569878846860356875215
Q gi|254780605|r  479 FA-HGVGHGVGSFLPVHEGPQGIS---RTNQEPLLPGMILSNEPGYYRCGAFGIR  529 (609)
Q Consensus       479 y~-HgtGHGVG~~l~VHE~P~~is---~~~~~~l~~Gmv~s~EPG~Y~~g~~GiR  529 (609)
T Consensus       144 ~v~~l~GH~i~ry-~ih~~~~-Ipn~~~~~~~~l~~g~v~aIEp~~t-~G~g~v~  195 (291)
T cd01088         144 PIRNLTGHSIERY-RLHAGKS-IPNVKGGEGTRLEEGDVYAIEPFAT-TGKGYVH  195 (291)
T ss_pred             EECCCCCCCCCCC-CCCCCCE-ECEECCCCCCEECCCCEEEEEEEEE-CCCCEEE
T ss_conf             0036525577772-2169975-3425289983660686899855740-5875263