HHsearch alignment for GI: 254780605 and conserved domain: cd01089

>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.99  E-value=0.064  Score=33.37  Aligned_cols=90  Identities=16%  Similarity=0.133  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC-C--CCCCCCCCCC--CCCC-----CCCCCCCCCCC
Q ss_conf             88433366778888899721789788889999873667741865-4--7764323211--3560-----77886237789
Q gi|254780605|r  435 EKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD-F--AHGVGHGVGS--FLPV-----HEGPQGISRTN  504 (609)
Q Consensus       435 e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d-y--~HgtGHGVG~--~l~V-----HE~P~~is~~~  504 (609)
T Consensus         3 KmR~Ag~i~a~~l~~~~~~i~p-G~tt~eld~~~~~~i~~~~~~~~~~~~~~~~G~~~p~CiSvNe~v~HGiP~-~-~~~   79 (228)
T cd01089           3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPL-K-SDA   79 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEECCCCC-C-CCC
T ss_conf             8999999999999999957869-996999999999999983043256766666777867275025444568999-8-888


Q ss_pred             CCEECCCCEEEECCCEEECCCCC
Q ss_conf             86005698788468603568752
Q gi|254780605|r  505 QEPLLPGMILSNEPGYYRCGAFG  527 (609)
Q Consensus       505 ~~~l~~Gmv~s~EPG~Y~~g~~G  527 (609)
T Consensus        80 ~~~L~~GDiV~iD~g~~~dGy~~  102 (228)
T cd01089          80 TYTLKDGDVVKIDLGCHIDGYIA  102 (228)
T ss_pred             CCCCCCCCEEEEEEEEEECCEEE
T ss_conf             73546899899977688687798