HHsearch alignment for GI: 254780605 and conserved domain: cd01089
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.99 E-value=0.064 Score=33.37 Aligned_cols=90 Identities=16% Similarity=0.133 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC-C--CCCCCCCCCC--CCCC-----CCCCCCCCCCC
Q ss_conf 88433366778888899721789788889999873667741865-4--7764323211--3560-----77886237789
Q gi|254780605|r 435 EKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD-F--AHGVGHGVGS--FLPV-----HEGPQGISRTN 504 (609)
Q Consensus 435 e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d-y--~HgtGHGVG~--~l~V-----HE~P~~is~~~ 504 (609)
T Consensus 3 KmR~Ag~i~a~~l~~~~~~i~p-G~tt~eld~~~~~~i~~~~~~~~~~~~~~~~G~~~p~CiSvNe~v~HGiP~-~-~~~ 79 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPL-K-SDA 79 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEECCCCC-C-CCC
T ss_conf 8999999999999999957869-996999999999999983043256766666777867275025444568999-8-888
Q ss_pred CCEECCCCEEEECCCEEECCCCC
Q ss_conf 86005698788468603568752
Q gi|254780605|r 505 QEPLLPGMILSNEPGYYRCGAFG 527 (609)
Q Consensus 505 ~~~l~~Gmv~s~EPG~Y~~g~~G 527 (609)
T Consensus 80 ~~~L~~GDiV~iD~g~~~dGy~~ 102 (228)
T cd01089 80 TYTLKDGDVVKIDLGCHIDGYIA 102 (228)
T ss_pred CCCCCCCCEEEEEEEEEECCEEE
T ss_conf 73546899899977688687798