HHsearch results for GI: 254780605 and protein with PDBid: 1o0x_A

>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00  E-value=3.2e-42  Score=312.53  Aligned_cols=228  Identities=20%  Similarity=0.195  Sum_probs=180.8

Q ss_pred             CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCC
Q ss_conf             115666199999987999984438999999875332100124530188999999987543302-7855554100001233
Q gi|254780605|r  307 SCLLRATKNKVEIEGMQTAHIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMR-NPLRDIAFNTIAASGP  385 (609)
Q Consensus       307 I~~lRaiKn~~EI~~mr~Ahi~DgvAl~kfl~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~-~~~~~~SF~TIva~G~  385 (609)
                      -..||.|||+.||+.||+|...-    .+.+.++.+.+.+|+||.+++..+.++..+.+.... .++.  ++++++..+.
T Consensus        10 ~~~m~~VKs~~EI~~~R~A~~ia----~~~~~~~~~~i~pG~te~ev~~~~~~~~~~~g~~~~~~g~~--~~~~~~~~~~   83 (262)
T 1o0x_A           10 HHHMIRIKTPSEIEKMKKAGKAV----AVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYG--GYKYATCVSV   83 (262)
T ss_dssp             ---CCCCCCHHHHHHHHHHHHHH----HHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGG--GCCCSEEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCEEECC
T ss_conf             54305629899999999999999----99999999877689979999999999999828853236767--7776568536


Q ss_pred             CCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf             54322224554332050389879983032010561222143210378888843336677888889972178978888999
Q gi|254780605|r  386 HAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLD  465 (609)
Q Consensus       386 N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD  465 (609)
                      +.+..|+.+.  +++.++.|+++++|.|++|.+|++|+|||+++|+|+++++++|+.|++++-+...+.. +|+++.+++
T Consensus        84 ~~~~~~~~~~--~~~~~~~gd~v~id~g~~~~gy~~d~tRT~~~G~~~~~~~~~~~~~~~a~~~~~~~~k-pG~~~~~v~  160 (262)
T 1o0x_A           84 NEEVVHGLPL--KEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIK-PGIRLGDVS  160 (262)
T ss_dssp             TTBCSCCCCC--TTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCC-TTSBHHHHH
T ss_pred             CCCCCCCCCC--CCCCCCCCCCEEEEECEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHH
T ss_conf             7553332357--7501016983389822224777266654203078788999999999999999998747-998999999


Q ss_pred             HHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCC----CCCCCEECCCCEEEECCCEEEC-----------------
Q ss_conf             9873667741865-47764323211356077886237----7898600569878846860356-----------------
Q gi|254780605|r  466 SIARIFLWKYGAD-FAHGVGHGVGSFLPVHEGPQGIS----RTNQEPLLPGMILSNEPGYYRC-----------------  523 (609)
Q Consensus       466 ~~aR~~l~~~g~d-y~HgtGHGVG~~l~VHE~P~~is----~~~~~~l~~Gmv~s~EPG~Y~~-----------------  523 (609)
                      .++|+++++.|++ +.|++|||||  |++||+|. ++    +.++.+|+||||+|+|||+|.+                 
T Consensus       161 ~~~~~~~~~~g~~~~~~~~GHgiG--l~~he~p~-~~~~~~~~~~~~le~Gmv~tvEp~~~~~~~~~~~~~d~~~~~~~~  237 (262)
T 1o0x_A          161 HCIQETVESVGFNVIRDYVGHGVG--RELHEDPQ-IPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVD  237 (262)
T ss_dssp             HHHHHHHHHTTCEECCSSCEEECS--SSSSEEEE-ECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETT
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCCC-CCCCCCCCCCCCCCCCCEEEECCEEECCCCCEEECCCCCEEEECC
T ss_conf             999999998299978687407357--81678864-356567999878658968997773541787337726887798228


Q ss_pred             CCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCC
Q ss_conf             8752150025999727877877664242210116
Q gi|254780605|r  524 GAFGIRIENVLCVSEPETINNGECLMLGFNTLTL  557 (609)
Q Consensus       524 g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~  557 (609)
                      |.+|+||||+|+||+.           +.|.||-
T Consensus       238 g~~g~~iEd~vlVTe~-----------G~E~LT~  260 (262)
T 1o0x_A          238 GSRCAHFEHTILITEN-----------GAEILTK  260 (262)
T ss_dssp             CCCEEECBEEEEECSS-----------SEEESSC
T ss_pred             CCCEEEECEEEEECCC-----------CCEECCC
T ss_conf             9517775509999599-----------6856599