HHsearch results for GI: 254780605 and protein with PDBid: 1wn1_A
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii OT3} PDB: 2how_A
Probab=100.00 E-value=0 Score=449.27 Aligned_cols=346 Identities=27% Similarity=0.330 Sum_probs=281.6
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCEE---
Q ss_conf 99999986023343067602842023443201355377870023322014786200035311215678741256357---
Q gi|254780605|r 182 KIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAIV--- 258 (609)
Q Consensus 182 Ki~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~~--- 258 (609)
|++++|+.|+++++|+++|++++||.||||+++.+....| ++++|..++++.|++.... ....+. ... ..+
T Consensus 2 Rl~rl~~~m~~~~ldalvi~~~~ni~YltG~~~~~~~~~~---~~lvv~~~g~~~li~~~~~-~~~~~~-~~~-~~~~~~ 75 (356)
T 1wn1_A 2 RLEKFIHLLGERGFDGALISPGTNLYYLTGLRLHEVGERL---AILAVSAEGDYRFLAPSLY-ENVVNN-FPA-TFWHDG 75 (356)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCSCCTTSC---CEEEEETTSCEEEEEEGGG-TTTTTT-SCE-EEECTT
T ss_pred HHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCCE---EEEEEECCCCEEEEECHHH-HHHHHC-CCE-EEEEEC
T ss_conf 7999999999879999997793335587299568888851---9999958998899978777-877632-880-589725
Q ss_pred -ECHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH-CCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -0744515778630135742897253177889753121-39567515432115666199999987999984438999999
Q gi|254780605|r 259 -LDMDMMDSRLVCLARTSMPILIDPKWISYRFFKVIAQ-KNGVMVEGSDPSCLLRATKNKVEIEGMQTAHIQDGVAMVYF 336 (609)
Q Consensus 259 -~~~~~~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~-~~~~~i~~~~pI~~lRaiKn~~EI~~mr~Ahi~DgvAl~kf 336 (609)
.+++.+...+..+.....++++|...... ....+.. .+..++...+++..+|+||++.||+.||+|......|+.++
T Consensus 76 ~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~ 154 (356)
T 1wn1_A 76 ENPYAKLREILEELGISKGRILIEDTMRAD-WLIGIMKLGKFTFQPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEI 154 (356)
T ss_dssp SCHHHHHHHHHHHTTCSSEEEEECTTSBHH-HHHHHGGGSCEEEEETHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEEECCHHH-HHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 788999999999838667628986120699-9999986689879986799999997399999999999999899999999
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCE
Q ss_conf 87533210012453018899999998754330278555541000012335432222455433205038987998303201
Q gi|254780605|r 337 LFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPLRDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQY 416 (609)
Q Consensus 337 l~wL~~~~~~~iTE~~ia~~Le~~R~~~~~~~~~~~~~~SF~TIva~G~N~AipHY~~~~~s~~~i~~~~~~LiDsG~qY 416 (609)
+. ....|+||.+++..++.+.+..+ .+.+|++|+++|+|++.+||.| +++++++||++++|+|++|
T Consensus 155 ~~----~i~~G~tE~ei~~~~~~~~~~~~-------~~~~~~~i~~~g~~~~~~h~~~---~~r~~~~Gd~v~id~g~~~ 220 (356)
T 1wn1_A 155 LT----WDLIGMKERELALKIELLIRELS-------DGIAFEPIVASGENAANPHHEP---GERKIRKGDIIILDYGARW 220 (356)
T ss_dssp TT----SCCTTCBHHHHHHHHHHHHHHHS-------SEESSCCEEEEGGGGGCTTCCC---CSCBCCTTCEEEEEECEEE
T ss_pred HH----HHHCCCCHHHHHHHHHHHHHHCC-------CCCCCCCCCCCCCCCCCCEECC---CCCCCCCCCEEEEEEEECC
T ss_conf 99----97639969999888987654033-------3345675114678631000014---3553337975799874012
Q ss_pred ECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 05612221432103788888433366778888899721789788889999873667741865--4776432321135607
Q gi|254780605|r 417 VNGTTDITRTIAIGDVDYEKKYYFTLVLKGMISVSTARFPQRTRGCDLDSIARIFLWKYGAD--FAHGVGHGVGSFLPVH 494 (609)
Q Consensus 417 ~~GtTDiTRT~~~G~~~~e~k~~yt~VLk~~ial~~a~fp~g~~g~~lD~~aR~~l~~~g~d--y~HgtGHGVG~~l~VH 494 (609)
.+|++|+|||+++|+|+++|++.|..+++++.+...+. ++|+++.+++.++|+++++.|++ +.|++||||| +++|
T Consensus 221 ~gY~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~-kpG~~~~~v~~~~~~~~~~~g~~~~~~~~~GHgiG--~~~~ 297 (356)
T 1wn1_A 221 KGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAV-REGIKAKDVDSRAREVISKAGYGEYFIHRTGHGLG--LDVH 297 (356)
T ss_dssp TTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHC-BTTSBHHHHHHHHHHHHHTTTCGGGCCSCSEEECS--SSSS
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECC--CCCC
T ss_conf 33246766320268863888999999999999999867-89989999899887788872677667787377515--8757
Q ss_pred CCCCCCCCCCCCEECCCCEEEECCCEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHCC
Q ss_conf 78862377898600569878846860356875215002599972787787766424221011653001107
Q gi|254780605|r 495 EGPQGISRTNQEPLLPGMILSNEPGYYRCGAFGIRIENVLCVSEPETINNGECLMLGFNTLTLCPIDRKLI 565 (609)
Q Consensus 495 E~P~~is~~~~~~l~~Gmv~s~EPG~Y~~g~~GiRIEn~v~v~~~~~~~~~~~~fl~Fe~lT~vP~~~~li 565 (609)
|.| .|++.++.+|+|||||++|||+|.||.+|+||||.++||+. +.|.||-.| ++|+
T Consensus 298 e~p-~i~~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~~~Vt~~-----------G~e~Lt~~p--~~l~ 354 (356)
T 1wn1_A 298 EEP-YIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEG-----------KGRRLTKAE--RELI 354 (356)
T ss_dssp EEE-EESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT-----------EEEESCCCC--CSCC
T ss_pred CCC-CCCCCCCCEECCCCEEEECCEEEECCCCEEEECCEEEEECC-----------CCEECCCCC--CEEE
T ss_conf 897-22799997878997899979148799886996767999899-----------878898999--7688