HHsearch results for GI: 254780605 and protein with PDBid: 3ovk_A
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.02 E-value=9.3e-10 Score=86.45 Aligned_cols=119 Identities=13% Similarity=0.209 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCCCEE
Q ss_conf 38899999986023343067602842023443201355377870023322014786200035311215678741256357
Q gi|254780605|r 179 SQEKIRDICKILHQKEVGAVFICDPSSIAWIFNIRGFDIPCSPYPLSRAILYADGKAEIFFDKQYINEQLKALLSAVAIV 258 (609)
Q Consensus 179 ~~eKi~~ir~~L~~~~~daliit~~d~IaWLlNiRG~Di~~tPv~~a~aiI~~~~~~~Lfvd~~k~~~~~~~~l~~~~~~ 258 (609)
.++|++++|+.|+++|+|+++||+++||.||+++.|+. ++++|+.+ +..|++|.++.. +.+.......+.
T Consensus 8 ~~~Ri~~l~~~m~~~~iDa~lit~~~ni~Yltgf~~~~--------~~lli~~~-~~~li~~~r~~~-~a~~~~~~~~i~ 77 (132)
T 3ovk_A 8 LEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAK-RRVLITDSRYTL-LAKASVEGFDII 77 (132)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESS-CEEEEECTTTHH-HHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHCCCCCC--------EEEEEECC-CCEEEEECHHHH-HHHHHCCCEEEE
T ss_conf 99999999999998699999987788800311467734--------69999479-874687145589-999557980899
Q ss_pred ECHHH----HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--CCEEECCCCCCHHHH
Q ss_conf 07445----157786301357428972531778897531213--956751543211566
Q gi|254780605|r 259 LDMDM----MDSRLVCLARTSMPILIDPKWISYRFFKVIAQK--NGVMVEGSDPSCLLR 311 (609)
Q Consensus 259 ~~~~~----~~~~l~~l~~~~~~i~id~~~~s~~~~~~l~~~--~~~~i~~~~pI~~lR 311 (609)
.+.. +...+... ...+|++|+ ++++..++.+.+. +..++...+.|..||
T Consensus 78 -~~~~~~~~l~~~l~~~--~~~~IgiE~-~~s~~~~~~L~~~l~~~~~v~~~~ii~~lR 132 (132)
T 3ovk_A 78 -ESRTPLKVVAELLEAD--QIDCLGFED-QVSFSFYQAMQAELSGITLLAQSGFVEHLR 132 (132)
T ss_dssp -ECSCHHHHHHHHHHHH--TCCEEEEET-TSBHHHHHHHHHHCTTCEEEEESSTTGGGC
T ss_pred -ECCCHHHHHHHHHHHC--CCCEEEECC-CCCHHHHHHHHHHCCCCEEEECHHHHHHHC
T ss_conf -7799899999999737--898799879-518999999996689998998759899749