RPSBLAST alignment of GI: 254780605 and protein with PDBid: 1qxy
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252
Score = 87.6 bits (216), Expect = 6e-18
Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 34/248 (13%)
Query: 314 KNKVEIEGMQTA-HIQDGVAMVYFLFWFYSQSLETITEIDIIKKLERCREEIGCKMRNPL 372
K + E++ ++ +I V + + IT ++ + EE G P+
Sbjct: 4 KTEEELQALKEIGYICAKV-----RNTMQAATKPGITTKELDNIAKELFEEYGAI-SAPI 57
Query: 373 RDIAFNTIAASGPHAAIIHYQATVQSNRLLQKDELLLLDSGAQYVNGTTDITRTIAIGDV 432
D F + + H S R++++ +L+ +D A D + +G+
Sbjct: 58 HDENFPGQTCISVNEEVAHGIP---SKRVIREGDLVNIDVSALKNGYYADTGISFVVGES 114
Query: 433 DYEKKYYFTLVLKGMISVSTARF-PQRTRGCDLDSIARIFLWKYGADFAHGVGHGVGSFL 491
D K V + A+ P ++ + GHGVG L
Sbjct: 115 DDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVG--L 172
Query: 492 PVHEGPQGI----SRTNQEPLLPGMILSNEPGYY-----------------RCGAFGIRI 530
+HE P + ++ L GM+L+ EP +F +I
Sbjct: 173 SLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQI 232
Query: 531 ENVLCVSE 538
E+ + V++
Sbjct: 233 EHTVIVTK 240