HHsearch alignment for GI: 254780606 and conserved domain: CHL00081

Probab=96.93  E-value=0.0021  Score=42.33  Aligned_cols=183  Identities=14%  Similarity=0.257  Sum_probs=84.5

Q ss_pred             CCCCEEEEEEECCCCCEEECCHHH--CCCEEEEECCCCCHHHHHHHHHHHHH----------HHCCHHHEEEEEECCCCC
Q ss_conf             678368984205788732112011--48469970787534479999999999----------856801107999723421
Q gi|254780606|r  388 SKANLALCLGKTISGESVIADLAN--MPHILVAGTTGSGKSVAINTMIMSLL----------YRLRPDECRMIMVDPKML  455 (744)
Q Consensus       388 ~~~~l~~~~g~~~~g~~~~~dl~~--~PH~lvaG~TgsGKS~~l~~~i~sl~----------~~~~p~~~~~~liD~k~~  455 (744)
T Consensus         7 ~~fPf~aIvGQe~~k~aLll~av~p~iGgVLi~G~~GtgKStlvRal-a~lLP~i~~v~~~~f~~~p~~p~~~~~~~~-~   84 (347)
T CHL00081          7 PVFPFTAIVGQEEMKLALLLNVIDPKIGGVMIMGDRGTGKSTTIRAL-VDLLPEIEVVKNDPFNSDPRDPDLMSDEVR-E   84 (347)
T ss_pred             CCCCHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH-HHHCCCCEEECCCCCCCCCCCCCCCCHHHH-H
T ss_conf             88984065384999999999825788786998789987499999999-985787422068876789898100242666-5


Q ss_pred             EECCCCCCC--CEEEEEEECH-----HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             000125775--2000044441-----787689999998667699999980778679999988642026776665432338
Q gi|254780606|r  456 ELSVYDGIP--HLLTPVVTNP-----KKAVMALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPM  528 (744)
Q Consensus       456 ~~~~~~~~p--h~~~~v~~~~-----~~~~~~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~  528 (744)
T Consensus        85 ~~~~~~~~~~~~~~~p~v~lPlgaTEDrv~GslDi-----e~--al~--~G~--------------~~f~pGl---La~A  138 (347)
T CHL00081         85 RIRNGEKIPTKKIKIPMVDLPLGATEDRVCGTIDI-----EK--ALT--EGV--------------KAFEPGL---LAKA  138 (347)
T ss_pred             HHCCCCCCCCEECCCCEEECCCCCCCCEECCCHHH-----HH--HHH--CCC--------------CCCCCCH---HHHC
T ss_conf             43146667521146862536888852301140009-----98--984--587--------------1156531---2220


Q ss_pred             CEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHH--------CCEE---EEEEEECCCCCCCCHHHHHHCCCCEEEEECCC
Q ss_conf             679998445687675310358999999999642--------0135---89998516544441467885056305720368
Q gi|254780606|r  529 PYIVIIVDEMADLMMVAGKEIEGAIQRLAQMAR--------AAGI---HLIMATQRPSVDVITGTIKANFPIRISFQVTS  597 (744)
Q Consensus       529 p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~r--------a~Gi---hlilatQrp~~~vi~~~ik~n~~~ri~~~v~~  597 (744)
T Consensus       139 ~rGiLyvDEINll----~d~~v~~LLda~a~G~~~VEReG~S~~~Pa~F~liaT~NPeEgeLrp~llDRF~l~v~v~~~~  214 (347)
T CHL00081        139 NRGILYVDEVNLL----DDHLVDILLDSAASGWNTVEREGISIRHPARFVLIGSGNPEEGELRPQLLDRFGMHAEIRTVK  214 (347)
T ss_pred             CCCEEEEEHHHHH----HHHHHHHHHHHHHCCEEEECCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHEEEEEECCCCC
T ss_conf             3885886145432----379999999998558089804642330575006885578655674888882632267458878


Q ss_pred             HHHCC
Q ss_conf             11100
Q gi|254780606|r  598 KIDSR  602 (744)
Q Consensus       598 ~~dsr  602 (744)
T Consensus       215 ~~e~R  219 (347)
T CHL00081        215 DPELR  219 (347)
T ss_pred             CHHHH
T ss_conf             98999