HHsearch alignment for GI: 254780606 and conserved domain: COG0433
>COG0433 HerA helicase [Replication, recombination, and repair].
Probab=97.43 E-value=0.00013 Score=50.63 Aligned_cols=73 Identities=23% Similarity=0.434 Sum_probs=57.9
Q ss_pred EEEEHHHHHHHHHHC-CHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHC
Q ss_conf 999844568767531-035899999999964201358999851654444146788505630572036811100326
Q gi|254780606|r 531 IVIIVDEMADLMMVA-GKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTIL 605 (744)
Q Consensus 531 ivvviDE~a~l~~~~-~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il 605 (744)
T Consensus 393 ~~~iieea~~~~p~~~~~~~~~~~~~iar~gRk~~v~l~~~tQrps--~l~~~v~~~~~tkii~r~~~~~d~~~~~ 466 (520)
T COG0433 393 LLIVIEEAHNFAPSSRKAPVKDIIERIAREGRKFGVGLVLATQRPS--DLDDLVLSQANTKIILRLVEPTDQKYIS 466 (520)
T ss_pred CCEEHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHH--HCCHHHHHCCCHHHHHCCCCCHHHHHHH
T ss_conf 4114077776387554214689999999860723541357886767--6307898610349774057822366656