HHsearch alignment for GI: 254780606 and conserved domain: COG0433

>COG0433 HerA helicase [Replication, recombination, and repair].
Probab=97.43  E-value=0.00013  Score=50.63  Aligned_cols=73  Identities=23%  Similarity=0.434  Sum_probs=57.9

Q ss_pred             EEEEHHHHHHHHHHC-CHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHC
Q ss_conf             999844568767531-035899999999964201358999851654444146788505630572036811100326
Q gi|254780606|r  531 IVIIVDEMADLMMVA-GKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTIL  605 (744)
Q Consensus       531 ivvviDE~a~l~~~~-~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il  605 (744)
T Consensus       393 ~~~iieea~~~~p~~~~~~~~~~~~~iar~gRk~~v~l~~~tQrps--~l~~~v~~~~~tkii~r~~~~~d~~~~~  466 (520)
T COG0433         393 LLIVIEEAHNFAPSSRKAPVKDIIERIAREGRKFGVGLVLATQRPS--DLDDLVLSQANTKIILRLVEPTDQKYIS  466 (520)
T ss_pred             CCEEHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHH--HCCHHHHHCCCHHHHHCCCCCHHHHHHH
T ss_conf             4114077776387554214689999999860723541357886767--6307898610349774057822366656