HHsearch alignment for GI: 254780606 and conserved domain: COG0470
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair].
Probab=95.66 E-value=0.046 Score=33.12 Aligned_cols=170 Identities=23% Similarity=0.320 Sum_probs=78.4
Q ss_pred HCCC-EEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEE-CCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 1484-699707875344799999999998568011079997-23421000125775200004444178768999999866
Q gi|254780606|r 411 NMPH-ILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMV-DPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREM 488 (744)
Q Consensus 411 ~~PH-~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~li-D~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em 488 (744)
T Consensus 22 ~~~halL~~Gp~G~Gktt~a~~lA~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~d~lel~~s~~~~~~-i~~~~vr~~ 97 (325)
T COG0470 22 RLPHALLFYGPPGVGKTTAALALAKELLCENPTGLLPCGHCRSCKLIPAGNH---PDFLELNPSDLRKID-IIVEQVREL 97 (325)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC---CCEEEECCCCCCCCC-CHHHHHHHH
T ss_conf 8876100379999978999999999965866433455200224443202568---865997732133330-069999999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEE
Q ss_conf 76999999807786799999886420267766654323386799984456876753103589999999996420135899
Q gi|254780606|r 489 EERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIHLI 568 (744)
Q Consensus 489 ~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~Gihli 568 (744)
T Consensus 98 ~~~------------------~~~~~-----------~~~~~kviiidead~mt~----~A~nallk~lEep~~~~~~il 144 (325)
T COG0470 98 AEF------------------LSESP-----------LEGGYKVVIIDEADKLTE----DAANALLKTLEEPPKNTRFIL 144 (325)
T ss_pred HHH------------------CCCCC-----------CCCCCEEEEEECCCCCCH----HHHHHHHHHCCCCCCCEEEEE
T ss_conf 986------------------04465-----------667726999732032698----888767543324888716999
Q ss_pred EEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHHCCCCCHHHHC--CCCCEEE
Q ss_conf 9851654444146788505630572036811100326763168856--8984686
Q gi|254780606|r 569 MATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTILGEHGAEQLL--GRGDMLY 621 (744)
Q Consensus 569 latQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~il~~~gae~l~--g~gd~l~ 621 (744)
T Consensus 145 ~~-n~~~-~il~-tI~SR-c~~i~f~~~~~~~~i~~~e~~~l~~i~~~~~gd~r~ 195 (325)
T COG0470 145 IT-NDPS-KILP-TIRSR-CQRIRFKPPSRLEAIAWLEDQGLEEIAAVAEGDARK 195 (325)
T ss_pred EE-CCHH-HCHH-HHHHH-EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 74-9855-5647-87756-078876774188999985075799999870406887