HHsearch alignment for GI: 254780606 and conserved domain: COG1205
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only].
Probab=97.24 E-value=0.0017 Score=42.95 Aligned_cols=113 Identities=26% Similarity=0.379 Sum_probs=65.6
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCC--------------------CCEECCCC----------
Q ss_conf 484699707875344799999999998568011079997234--------------------21000125----------
Q gi|254780606|r 412 MPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPK--------------------MLELSVYD---------- 461 (744)
Q Consensus 412 ~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k--------------------~~~~~~~~---------- 461 (744)
T Consensus 85 G~~vvVtTgTgSGKTe~FllPIld~~l~~~~a--~AL~lYPtnALa~DQ~~rl~~~~~~~~~~v~~~~y~Gdt~~~~r~~ 162 (851)
T COG1205 85 GRNVVVTTGTGSGKTESFLLPILDHLLRDPSA--RALLLYPTNALANDQAERLRELISDLPGKVTFGRYTGDTPPEERRA 162 (851)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC--EEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH
T ss_conf 99889978998854589899999998308665--0899804377676699999999984787513544348896788899
Q ss_pred ---CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHH
Q ss_conf ---77520000444417876899999986676999999807786799999886420267766654323386799984456
Q gi|254780606|r 462 ---GIPHLLTPVVTNPKKAVMALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEM 538 (744)
Q Consensus 462 ---~~ph~~~~v~~~~~~~~~~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~ 538 (744)
T Consensus 163 ~~~~pp~I---llTNpdMLh~~l------------------lr~~~~~~~~~~---------------~L--k~lVvDEl 204 (851)
T COG1205 163 IIRNPPDI---LLTNPDMLHYLL------------------LRNHDAWLWLLR---------------NL--KYLVVDEL 204 (851)
T ss_pred HHHCCCCE---EEECHHHHHHHH------------------HCCCCCHHHHHH---------------CC--CEEEEECC
T ss_conf 87389978---983889998986------------------368822788873---------------27--58998444
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHCCE
Q ss_conf 87675310358999999999642013
Q gi|254780606|r 539 ADLMMVAGKEIEGAIQRLAQMARAAG 564 (744)
Q Consensus 539 a~l~~~~~~~~e~~~~~la~~~ra~G 564 (744)
T Consensus 205 HtYrGv~GS~vA~llRRL~~~~~~~~ 230 (851)
T COG1205 205 HTYRGVQGSEVALLLRRLLRRLRRYG 230 (851)
T ss_pred EECCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 12156037889999999999972458