HHsearch alignment for GI: 254780606 and conserved domain: COG4178
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].
Probab=92.24 E-value=0.57 Score=25.67 Aligned_cols=153 Identities=20% Similarity=0.300 Sum_probs=65.2
Q ss_pred CCCEEECCH----HHCCCEEEEECCCCCHHHHHHHHHHHHHHHC-----CHHHEEEEEEC--CCC--CEEC---CCCCCC
Q ss_conf 887321120----1148469970787534479999999999856-----80110799972--342--1000---125775
Q gi|254780606|r 401 SGESVIADL----ANMPHILVAGTTGSGKSVAINTMIMSLLYRL-----RPDECRMIMVD--PKM--LELS---VYDGIP 464 (744)
Q Consensus 401 ~g~~~~~dl----~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~-----~p~~~~~~liD--~k~--~~~~---~~~~~p 464 (744)
T Consensus 404 ~~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRai-aGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~ 482 (604)
T COG4178 404 DGQTLLSELNFEVRPGERLLITGESGAGKTSLLRAL-AGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAA 482 (604)
T ss_pred CCCEEECCCEEEECCCCEEEEECCCCCCHHHHHHHH-HCCCCCCCCCEECCCCCCEEEECCCCCCCCCCHHHHHHCCCCC
T ss_conf 987421465265479987998789998788999999-6458567874416898755771488777876589998089997
Q ss_pred CEEEEEEECHHHHHHHHHH-----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHH
Q ss_conf 2000044441787689999-----99866769999998077867999998864202677666543233867999844568
Q gi|254780606|r 465 HLLTPVVTNPKKAVMALKW-----AVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMA 539 (744)
Q Consensus 465 h~~~~v~~~~~~~~~~l~~-----~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a 539 (744)
T Consensus 483 ~---~-~~-d~~l~~vL~~vgL~~L~~rl~~~~~W~~vLS----~GEqQRlafARilL~---------kP-~~v~LDEAT 543 (604)
T COG4178 483 P---D-FS-DAELVAVLHKVGLGDLAERLDEEDRWDRVLS----GGEQQRLAFARLLLH---------KP-KWVFLDEAT 543 (604)
T ss_pred C---C-CC-HHHHHHHHHHCCCHHHHHHHHCCCCHHHHCC----HHHHHHHHHHHHHHC---------CC-CEEEEECCH
T ss_conf 7---7-99-5999999998191989998733275766458----527899999999970---------99-989980601
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHC--CEEEEEEEECCCCCCCC
Q ss_conf 76753103589999999996420--13589998516544441
Q gi|254780606|r 540 DLMMVAGKEIEGAIQRLAQMARA--AGIHLIMATQRPSVDVI 579 (744)
Q Consensus 540 ~l~~~~~~~~e~~~~~la~~~ra--~GihlilatQrp~~~vi 579 (744)
T Consensus 544 sALD---e~~e~---~l~q~l~~~lp~~tvISV~Hr~tl~~~ 579 (604)
T COG4178 544 SALD---EETED---RLYQLLKEELPDATVISVGHRPTLWNF 579 (604)
T ss_pred HCCC---HHHHH---HHHHHHHHHCCCCEEEEECCCHHHHHH
T ss_conf 1259---57899---999999854899789995560005788