HHsearch alignment for GI: 254780606 and conserved domain: COG4618
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].
Probab=95.93 E-value=0.018 Score=35.91 Aligned_cols=158 Identities=20% Similarity=0.283 Sum_probs=82.4
Q ss_pred CEEECCH----HHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCC----CCCCC---EEEE-E
Q ss_conf 7321120----114846997078753447999999999985680110799972342100012----57752---0000-4
Q gi|254780606|r 403 ESVIADL----ANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVY----DGIPH---LLTP-V 470 (744)
Q Consensus 403 ~~~~~dl----~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~----~~~ph---~~~~-v 470 (744)
T Consensus 349 ~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~--w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTI 426 (580)
T COG4618 349 KPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGI--WPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTI 426 (580)
T ss_pred CCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCC--CCCCCCCEEECCHHHHCCCHHHHCCCCCCCCCCCEECCCCH
T ss_conf 7612062367658866788788876577899999811--35678737756264512798885113172765430057719
Q ss_pred ---------EECHHHHHHHHHHH-HHHHHHHH----HHHHHCCCCCH-HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH
Q ss_conf ---------44417876899999-98667699----99998077867-99999886420267766654323386799984
Q gi|254780606|r 471 ---------VTNPKKAVMALKWA-VREMEERY----RKMSHLSVRNI-KSYNERISTMYGEKPQGCGDDMRPMPYIVIIV 535 (744)
Q Consensus 471 ---------~~~~~~~~~~l~~~-~~em~~r~----~~~~~~~~~~i-~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvvi 535 (744)
T Consensus 427 aeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlY---------G~P~lv-VL 496 (580)
T COG4618 427 AENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALY---------GDPFLV-VL 496 (580)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---------CCCCEE-EE
T ss_conf 99987316668879999999873758999717687667657898877723789999999970---------897089-95
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf 4568767531035899999999964201358999851654
Q gi|254780606|r 536 DEMADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 536 DE~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 497 DEPNsNL---D~~GE~AL~~Ai~~~k~rG~~vvviaHRPs 533 (580)
T COG4618 497 DEPNSNL---DSEGEAALAAAILAAKARGGTVVVIAHRPS 533 (580)
T ss_pred CCCCCCC---CHHHHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 5898776---526799999999999976987999926777