HHsearch alignment for GI: 254780606 and conserved domain: PHA00520

Probab=96.48  E-value=0.02  Score=35.65  Aligned_cols=124  Identities=20%  Similarity=0.321  Sum_probs=65.6

Q ss_pred             CCCCEEECCHHH----CCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCCCCCEEEEE-EECH
Q ss_conf             788732112011----48469970787534479999999999856801107999723421000125775200004-4441
Q gi|254780606|r  400 ISGESVIADLAN----MPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDGIPHLLTPV-VTNP  474 (744)
Q Consensus       400 ~~g~~~~~dl~~----~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~~ph~~~~v-~~~~  474 (744)
T Consensus        97 ~a~~pvv~~~~~~~i~SG~~vv~G~t~sGKT~~lna~~~~~~~k~~~-----v~IRwGE-p~e~yde~e---~~~~~sdL  167 (326)
T PHA00520         97 VACSPVVHRWGGHRIASGMVIVTGGTGSGKTPLLNALGEPLGGKDKD-----VTVRWGE-PLEGYDEAE---RPLYGSDL  167 (326)
T ss_pred             CCCCCCEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCC-----EEEEECC-CCCCCCCCC---CCCCCCCH
T ss_conf             02453100036652104249996478888675566542102589987-----4898368-543346201---33210449


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC--------
Q ss_conf             787689999998667699999980778679999988642026776665432338679998445687675310--------
Q gi|254780606|r  475 KKAVMALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG--------  546 (744)
Q Consensus       475 ~~~~~~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~--------  546 (744)
T Consensus       168 ~~~l~v---~l~a~---------------------------------------~~~~vvvvDSlR~v~~~l~Gnat~GGI  205 (326)
T PHA00520        168 NVFLAV---ILRAM---------------------------------------LQHRVVVVDSLRNVIFALGGNATSGGI  205 (326)
T ss_pred             HHHHHH---HHHHH---------------------------------------HCCCEEEEECHHHHHHHCCCCCCCCCH
T ss_conf             999999---99986---------------------------------------457179952146666441378787744


Q ss_pred             -HHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf             -35899999999964201358999851654
Q gi|254780606|r  547 -KEIEGAIQRLAQMARAAGIHLIMATQRPS  575 (744)
Q Consensus       547 -~~~e~~~~~la~~~ra~GihlilatQrp~  575 (744)
T Consensus       206 Sr~~y~~LTdl~n~aas~gc~vV~~l-NPm  234 (326)
T PHA00520        206 SRGAYDLLTDIGNMAASRGCVVVASL-NPM  234 (326)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEC-CCC
T ss_conf             68899999888888876395799973-888