HHsearch alignment for GI: 254780606 and conserved domain: PRK00409

>PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed.
Probab=93.88  E-value=0.31  Score=27.48  Aligned_cols=158  Identities=15%  Similarity=0.182  Sum_probs=90.9

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
Q ss_conf             46997078753447999999999985680110799972342100012577520000444417876899999986676999
Q gi|254780606|r  414 HILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREMEERYR  493 (744)
Q Consensus       414 H~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em~~r~~  493 (744)
T Consensus       327 ~liITGPNtGGKTv~LKtvgL~~lMaq~G---l~vPa~e-~s~~~~f~~---i-~adIGD~QSie~~LSTFS~hm~~i~~  398 (780)
T PRK00409        327 VLVITGPNTGGKTVTLKTLGLAALMAKSG---LPIPAAE-PSEIPVFKE---V-FADIGDEQSIEQSLSTFSGHMTNIVR  398 (780)
T ss_pred             EEEEECCCCCCCEEHHHHHHHHHHHHHHC---CCCCCCC-CCCCCCCCE---E-EEEECCCHHHHHCHHHHHHHHHHHHH
T ss_conf             89996898888563799999999999829---9975168-980423463---8-99827712133265249999999999


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECC
Q ss_conf             99980778679999988642026776665432338679998445687675310358999999999642013589998516
Q gi|254780606|r  494 KMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQR  573 (744)
Q Consensus       494 ~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQr  573 (744)
T Consensus       399 il~~a~-----------------------------~~sLVLlDElG~--GTDP~EGaALa~aile~l~~~~~~~i~TTH~  447 (780)
T PRK00409        399 ILEKAD-----------------------------ENSLVLFDELGA--GTDPDEGAALAISILDYLRKRGAKIIATTHY  447 (780)
T ss_pred             HHHHCC-----------------------------CCEEEEECCCCC--CCCHHHHHHHHHHHHHHHHHCCCEEEEECCH
T ss_conf             997389-----------------------------980881232358--9984565999999999999779979994776


Q ss_pred             CCCCCCHHHHHHCCCCEEEEECCCH-HHCCHHCCCCCH
Q ss_conf             5444414678850563057203681-110032676316
Q gi|254780606|r  574 PSVDVITGTIKANFPIRISFQVTSK-IDSRTILGEHGA  610 (744)
Q Consensus       574 p~~~vi~~~ik~n~~~ri~~~v~~~-~dsr~il~~~ga  610 (744)
T Consensus       448 ~~lK~~a~~~~~~~nas~~FD~~tl~PtYrl~~G~pG~  485 (780)
T PRK00409        448 KELKALKYNREGVENASVEFDEETLRPTYRLLIGIPGR  485 (780)
T ss_pred             HHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCC
T ss_conf             99999972799818988887402378606870599976