HHsearch alignment for GI: 254780606 and conserved domain: PRK00409
>PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed.
Probab=93.88 E-value=0.31 Score=27.48 Aligned_cols=158 Identities=15% Similarity=0.182 Sum_probs=90.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46997078753447999999999985680110799972342100012577520000444417876899999986676999
Q gi|254780606|r 414 HILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREMEERYR 493 (744)
Q Consensus 414 H~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em~~r~~ 493 (744)
T Consensus 327 ~liITGPNtGGKTv~LKtvgL~~lMaq~G---l~vPa~e-~s~~~~f~~---i-~adIGD~QSie~~LSTFS~hm~~i~~ 398 (780)
T PRK00409 327 VLVITGPNTGGKTVTLKTLGLAALMAKSG---LPIPAAE-PSEIPVFKE---V-FADIGDEQSIEQSLSTFSGHMTNIVR 398 (780)
T ss_pred EEEEECCCCCCCEEHHHHHHHHHHHHHHC---CCCCCCC-CCCCCCCCE---E-EEEECCCHHHHHCHHHHHHHHHHHHH
T ss_conf 89996898888563799999999999829---9975168-980423463---8-99827712133265249999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECC
Q ss_conf 99980778679999988642026776665432338679998445687675310358999999999642013589998516
Q gi|254780606|r 494 KMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQR 573 (744)
Q Consensus 494 ~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQr 573 (744)
T Consensus 399 il~~a~-----------------------------~~sLVLlDElG~--GTDP~EGaALa~aile~l~~~~~~~i~TTH~ 447 (780)
T PRK00409 399 ILEKAD-----------------------------ENSLVLFDELGA--GTDPDEGAALAISILDYLRKRGAKIIATTHY 447 (780)
T ss_pred HHHHCC-----------------------------CCEEEEECCCCC--CCCHHHHHHHHHHHHHHHHHCCCEEEEECCH
T ss_conf 997389-----------------------------980881232358--9984565999999999999779979994776
Q ss_pred CCCCCCHHHHHHCCCCEEEEECCCH-HHCCHHCCCCCH
Q ss_conf 5444414678850563057203681-110032676316
Q gi|254780606|r 574 PSVDVITGTIKANFPIRISFQVTSK-IDSRTILGEHGA 610 (744)
Q Consensus 574 p~~~vi~~~ik~n~~~ri~~~v~~~-~dsr~il~~~ga 610 (744)
T Consensus 448 ~~lK~~a~~~~~~~nas~~FD~~tl~PtYrl~~G~pG~ 485 (780)
T PRK00409 448 KELKALKYNREGVENASVEFDEETLRPTYRLLIGIPGR 485 (780)
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCC
T ss_conf 99999972799818988887402378606870599976