HHsearch alignment for GI: 254780606 and conserved domain: PRK05636
>PRK05636 replicative DNA helicase; Provisional.
Probab=96.63 E-value=0.017 Score=36.17 Aligned_cols=150 Identities=15% Similarity=0.162 Sum_probs=74.3
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECC-------CCCCC--CEEEEEEECHHHHHH
Q ss_conf 011484699707875344799999999998568011079997234210001-------25775--200004444178768
Q gi|254780606|r 409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSV-------YDGIP--HLLTPVVTNPKKAVM 479 (744)
Q Consensus 409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~-------~~~~p--h~~~~v~~~~~~~~~ 479 (744)
T Consensus 264 l~~G~LiIiAARPsmGKTalAlnia~n~A~~~---g~~v~~fSLEMs~~ql~~Rlla~~s~V~~~~ir~g~l~~~~~--~ 338 (507)
T PRK05636 264 LRGGQMIIVAARPGVGKSTIALDFMRSASIKN---NKASVIFSLEMSKSEIVMRLLSAEAEVRLADMRGGKMDEDAW--E 338 (507)
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHH--H
T ss_conf 88356799973787866899999999999876---993799715699899999999984798878885588788999--9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC------HHHHHHH
Q ss_conf 9999998667699999980778679999988642026776665432338679998445687675310------3589999
Q gi|254780606|r 480 ALKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAG------KEIEGAI 553 (744)
Q Consensus 480 ~l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~------~~~e~~~ 553 (744)
T Consensus 339 ~l~~a~~~l~~~pl~IdD~~~lti~~Ira~aRrlk~~~------~---l--~livVDYLQ-Lm~~~~~~~~R~~ev~~IS 406 (507)
T PRK05636 339 KLVQRLGKIAQAPIFIDDSANLTMMEIRSKARRLKQKH------D---L--KMIVVDYLQ-LMSSGKRVESRQQEVSEFS 406 (507)
T ss_pred HHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHC------C---C--CEEEEEHHH-HCCCCCCCCCHHHHHHHHH
T ss_conf 99999999861988998499976999999999998617------9---9--989984588-4568888766899999999
Q ss_pred HHHHHHHHCCEEEEEEEECCCC
Q ss_conf 9999964201358999851654
Q gi|254780606|r 554 QRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 554 ~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 407 r~LK~lAkel~vpVi~LsQLnR 428 (507)
T PRK05636 407 RQLKLLAKELDVPLIAISQLNR 428 (507)
T ss_pred HHHHHHHHHHCCCEEEECCCCC
T ss_conf 9999999997998899712684