HHsearch alignment for GI: 254780606 and conserved domain: PRK05642
>PRK05642 DNA replication initiation factor; Validated.
Probab=92.89 E-value=0.24 Score=28.26 Aligned_cols=64 Identities=17% Similarity=0.369 Sum_probs=38.0
Q ss_pred EEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCC--CHHHHHHCCCCEEEEECCC
Q ss_conf 99844568767531035899999999964201358999851654444--1467885056305720368
Q gi|254780606|r 532 VIIVDEMADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDV--ITGTIKANFPIRISFQVTS 597 (744)
Q Consensus 532 vvviDE~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~v--i~~~ik~n~~~ri~~~v~~ 597 (744)
T Consensus 100 ~l~IDDi~~i~--g~~~~e~~lF~l~N~~~~~~~~llits~~~P~~l~~~l~DL~SRl~~~~~~~i~~ 165 (234)
T PRK05642 100 LVCIDDLDVIA--GKADWEEALFHLFNRLRDSGRRLLLAASKSPRELPVKLPDLKSRLTLALVFQMRG 165 (234)
T ss_pred EEEEECHHHHC--CCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHHHHHHCCCEEEECC
T ss_conf 89893645546--8859999999999999983995999578795552300167999995781275148