HHsearch alignment for GI: 254780606 and conserved domain: PRK11022
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional.
Probab=94.43 E-value=0.4 Score=26.70 Aligned_cols=183 Identities=17% Similarity=0.229 Sum_probs=82.2
Q ss_pred EECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHC---CHHHEEEEEECCCCC---EEC---------CCCCCCCEEEE
Q ss_conf 211201148469970787534479999999999856---801107999723421---000---------12577520000
Q gi|254780606|r 405 VIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRL---RPDECRMIMVDPKML---ELS---------VYDGIPHLLTP 469 (744)
Q Consensus 405 ~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~---~p~~~~~~liD~k~~---~~~---------~~~~~ph~~~~ 469 (744)
T Consensus 26 Vsf~i~~GEilgivGeSGsGKSTl~~~il-gll~~~~~~~~g~i~~~g~dl~~~~~~~~~~~~g~~i~~vfQdp~~sLnP 104 (327)
T PRK11022 26 ISYSVKQGEVVGIVGESGSGKSVSSLAIM-GLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNP 104 (327)
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHHHH-CCCCCCCCEEEEEEEECCEECCCCCHHHHHHHHCCCEEEEECCCHHHCCH
T ss_conf 18798899999999999878999999997-48898997654279999999774999999986377669996085132074
Q ss_pred EEECHHHHHHHHHHH----HHHH-HHHHHHHHHCCCCCHHHH-H-----------HHHHHHHCCCCCCCCCCCCCCCEEE
Q ss_conf 444417876899999----9866-769999998077867999-9-----------9886420267766654323386799
Q gi|254780606|r 470 VVTNPKKAVMALKWA----VREM-EERYRKMSHLSVRNIKSY-N-----------ERISTMYGEKPQGCGDDMRPMPYIV 532 (744)
Q Consensus 470 v~~~~~~~~~~l~~~----~~em-~~r~~~~~~~~~~~i~~~-n-----------~~~~~~~~~~~~~~~~~~~~~p~iv 532 (744)
T Consensus 105 ~~tv~~~i~e~l~~~~~~~~~~~~~r~~elL~~vgl~~~~~~l~~yP~eLSGGq~QRV~IArA---------L~~~P~-l 174 (327)
T PRK11022 105 CYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMA---------IACRPK-L 174 (327)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCHHHHHHHHHHHH---------HHHCCC-E
T ss_conf 555557677788875278889999999999987158568889742855469999999999999---------970999-9
Q ss_pred EEHHHHHH-HHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEE----ECCCHHHCCHHCCC
Q ss_conf 98445687-67531035899999999964201358999851654444146788505630572----03681110032676
Q gi|254780606|r 533 IIVDEMAD-LMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISF----QVTSKIDSRTILGE 607 (744)
Q Consensus 533 vviDE~a~-l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~----~v~~~~dsr~il~~ 607 (744)
T Consensus 175 LIaDEPTsaLD~~~q~~Il~l---l~~l~~~~g~til~ITHDl~--~v-----~~~aDri~VMy~G~iVE~G~~~~i~~~ 244 (327)
T PRK11022 175 LIADEPTTALDVTIQAQIIEL---LLELQQKENMALVLITHDLA--LV-----AEAAHKIIVMYAGQVVETGDAHEIFRA 244 (327)
T ss_pred EEECCCCCCCCHHHHHHHHHH---HHHHHHHHCCCEEEEECCHH--HH-----HHHCCEEEEEECCEEEEECCHHHHHHC
T ss_conf 998388765799999999999---99999971994899928899--99-----986998999989889997779999707
Q ss_pred C
Q ss_conf 3
Q gi|254780606|r 608 H 608 (744)
Q Consensus 608 ~ 608 (744)
T Consensus 245 P 245 (327)
T PRK11022 245 P 245 (327)
T ss_pred C
T ss_conf 9