HHsearch alignment for GI: 254780606 and conserved domain: PRK11131
>PRK11131 ATP-dependent RNA helicase HrpA; Provisional.
Probab=97.59 E-value=0.00088 Score=44.93 Aligned_cols=25 Identities=32% Similarity=0.599 Sum_probs=14.6
Q ss_pred HHCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 1148469970787534479999999
Q gi|254780606|r 410 ANMPHILVAGTTGSGKSVAINTMIM 434 (744)
Q Consensus 410 ~~~PH~lvaG~TgsGKS~~l~~~i~ 434 (744)
T Consensus 87 ~~nqVvii~GeTGsGKTTQiPq~~l 111 (1295)
T PRK11131 87 RDHQVVIVAGETGSGKTTQLPKICL 111 (1295)
T ss_pred HHCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 9799699976899987889999999