HHsearch alignment for GI: 254780606 and conserved domain: PRK11153
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional.
Probab=93.90 E-value=0.19 Score=28.92 Aligned_cols=190 Identities=16% Similarity=0.227 Sum_probs=84.2
Q ss_pred EECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCC---CCEEC--------CCCCCCCEEE--EEE
Q ss_conf 2112011484699707875344799999999998568011079997234---21000--------1257752000--044
Q gi|254780606|r 405 VIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPK---MLELS--------VYDGIPHLLT--PVV 471 (744)
Q Consensus 405 ~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k---~~~~~--------~~~~~ph~~~--~v~ 471 (744)
T Consensus 24 Vsl~I~~Gei~giIG~SGaGKSTLlr~i-~gL-~~ptsG~I~~~G~dl~~l~~~~l~~~Rr~Ig~ifQ~-~~l~~~~tV~ 100 (343)
T PRK11153 24 VSLHVPAGQIYGVIGASGAGKSTLIRCV-NLL-ERPTSGSVIVDGQDLTTLSESELTKARRQIGMIFQH-FNLLSSRTVF 100 (343)
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHHH-HCC-CCCCCEEEEECCEECCCCCHHHHHHHHCCEEEEECC-CCCCCCCCHH
T ss_conf 1889989989999999998699999999-659-999963999999999879988999986386999506-6337887289
Q ss_pred ECHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCHHH-H--------HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHH
Q ss_conf 44178768999999866769-99999807786799-9--------99886420267766654323386799984456876
Q gi|254780606|r 472 TNPKKAVMALKWAVREMEER-YRKMSHLSVRNIKS-Y--------NERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADL 541 (744)
Q Consensus 472 ~~~~~~~~~l~~~~~em~~r-~~~~~~~~~~~i~~-~--------n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l 541 (744)
T Consensus 101 env~~~l~~~~~~k~~~~~rv~elL~~vgL~~~~~~~p~~LSGGqkQRV~IArA---------La~~P~i-Ll~DEPTsa 170 (343)
T PRK11153 101 GNVALPLELDNTPKDEIKRRVTELLDLVGLGDKHDSYPANLSGGQKQRVAIARA---------LASNPKV-LLCDEATSA 170 (343)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHH---------HHCCCCE-EEEECCCCC
T ss_conf 999999997699999999999999987799447619751189999999999999---------8669999-999288765
Q ss_pred HHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEE----CCCHHHCCHHCCCCCH---HHHC
Q ss_conf 75310358999999999642013589998516544441467885056305720----3681110032676316---8856
Q gi|254780606|r 542 MMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQ----VTSKIDSRTILGEHGA---EQLL 614 (744)
Q Consensus 542 ~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~----v~~~~dsr~il~~~ga---e~l~ 614 (744)
T Consensus 171 L--Dp~t~~~Il~lL~~l~~e~g~TivlITHdm~--~v----~-~icdrVaVm~~G~IVE~G~~~evf~~P~~~~tk~li 241 (343)
T PRK11153 171 L--DPATTRSILELLKDINRRLGLTILLITHEMD--VV----K-RICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFI 241 (343)
T ss_pred C--CHHHHHHHHHHHHHHHHHHCCEEEEECCCHH--HH----H-HHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHC
T ss_conf 8--9999999999999999961989999888999--99----9-869999999898899986889997389997999970
Q ss_pred CC
Q ss_conf 89
Q gi|254780606|r 615 GR 616 (744)
Q Consensus 615 g~ 616 (744)
T Consensus 242 ~~ 243 (343)
T PRK11153 242 QS 243 (343)
T ss_pred CC
T ss_conf 88