HHsearch alignment for GI: 254780606 and conserved domain: PRK12608

>PRK12608 transcription termination factor Rho; Provisional.
Probab=93.79  E-value=0.53  Score=25.88  Aligned_cols=54  Identities=9%  Similarity=0.168  Sum_probs=41.9

Q ss_pred             HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCC
Q ss_conf             011484699707875344799999999998568011079997234210001257
Q gi|254780606|r  409 LANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDG  462 (744)
Q Consensus       409 l~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~  462 (744)
T Consensus       129 IGkGQRgLIVAPPkaGKT~LLq~IA~aI~~NhPev~livLLIDERPEEVTdm~r  182 (379)
T PRK12608        129 IGKGQRGLIVAPPRAGKTILLQQIAQAVAANHPDIHLMVLLIDERPEEVTDMKR  182 (379)
T ss_pred             CCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
T ss_conf             345740127458986578999999999985799848999981689358888886