HHsearch alignment for GI: 254780606 and conserved domain: PRK13833

Probab=97.44  E-value=0.00016  Score=49.93  Aligned_cols=112  Identities=21%  Similarity=0.364  Sum_probs=61.1

Q ss_pred             CCCHHHHHHHHHHHHHHHCC---------------CCCEE-EE---ECCCCEEEEECCCCCCCEEEHHHHHCCHHHCCCC
Q ss_conf             86399998599999987147---------------76327-75---1898345442688888707658751281211467
Q gi|254780606|r  329 GIKSSRVIGLADDIARSMSS---------------LSARV-AV---IPKRNAIGIELPNETRETVYLRQIIESRSFSHSK  389 (744)
Q Consensus       329 g~~~~~~~~~~~d~~~~~~~---------------~~~~~-~~---~pg~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~  389 (744)
T Consensus        56 ~~~~~~~~~~i~~iA~~~g~~id~~~Pilda~LP~~G~R~~~v~PP~~~g~sitIRk~--~~~~~tl~dlv~~g~~t~~~  133 (323)
T PRK13833         56 EMSSAAAEIVIGSVAHALQSEADDERPIISGELPIGGHRFEGLLPPVVSGPAFTIRRR--ASRLIPLDDYVRSKVMTEAQ  133 (323)
T ss_pred             CCCHHHHHHHHHHHHHHHCCEECCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEECC--CCCCCCHHHHHHCCCCCHHH
T ss_conf             5899999999999999859986689855899879999899998788679952999687--89999999998769999999


Q ss_pred             CCEEEEEEECCCCCEEECCH-HHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEE-CCCCCEECC
Q ss_conf             83689842057887321120-11484699707875344799999999998568011079997-234210001
Q gi|254780606|r  390 ANLALCLGKTISGESVIADL-ANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMV-DPKMLELSV  459 (744)
Q Consensus       390 ~~l~~~~g~~~~g~~~~~dl-~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~li-D~k~~~~~~  459 (744)
T Consensus       134 ~~-------------~L~~aV~~r~nilVsGgTGSGKTTllnaL~~~i-~~~~p~e-RivtIEDt~--EL~~  188 (323)
T PRK13833        134 AS-------------TIRSAISSRLNIVISGGTGSGKTTLANAVIAEI-VASAPED-RLVILEDTA--EIQC  188 (323)
T ss_pred             HH-------------HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH-CCCCCHH-EEEEECCCC--CCCC
T ss_conf             99-------------999999818968999177775689999999864-0289323-399945750--1146