HHsearch alignment for GI: 254780606 and conserved domain: TIGR03185
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=91.02 E-value=0.23 Score=28.31 Aligned_cols=24 Identities=33% Similarity=0.750 Sum_probs=14.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 846997078753447999999999
Q gi|254780606|r 413 PHILVAGTTGSGKSVAINTMIMSL 436 (744)
Q Consensus 413 PH~lvaG~TgsGKS~~l~~~i~sl 436 (744)
T Consensus 29 ~i~li~G~NG~GKTTll~Ai~~~L 52 (650)
T TIGR03185 29 PIILIGGLNGAGKTTLLDAIQLGL 52 (650)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 879997799997899999999995