HHsearch alignment for GI: 254780606 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=96.61 E-value=0.015 Score=36.43 Aligned_cols=152 Identities=19% Similarity=0.221 Sum_probs=73.5
Q ss_pred EEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEEC--CCC---------------CEECCCCCCCCE
Q ss_conf 321120114846997078753447999999999985680110799972--342---------------100012577520
Q gi|254780606|r 404 SVIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVD--PKM---------------LELSVYDGIPHL 466 (744)
Q Consensus 404 ~~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD--~k~---------------~~~~~~~~~ph~ 466 (744)
T Consensus 16 ~vsl~i~~Ge~~~i~GpSGsGKSTLL~~-i~gl~---~p~sG~i~~~g~~~~~~~~~~~~~~rr~~iG~VfQ~~~L~~~l 91 (206)
T TIGR03608 16 DLNLTIEKGKMVAIVGESGSGKSTLLNI-IGLLE---KPDSGQVYLNGQETPPINSKKASKFRREKLGYLFQNFALIENE 91 (206)
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHHHH-HHCCC---CCCCEEEEECCEECCCCCHHHHHHHHHCCEEEECCCCCCCCCC
T ss_conf 8077986998999987999709999999-97599---9897599999999998998899999865889985798767989
Q ss_pred EEEEEECHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCHHH---------HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHH
Q ss_conf 0004444178768999999866769-99999807786799---------9998864202677666543233867999844
Q gi|254780606|r 467 LTPVVTNPKKAVMALKWAVREMEER-YRKMSHLSVRNIKS---------YNERISTMYGEKPQGCGDDMRPMPYIVIIVD 536 (744)
Q Consensus 467 ~~~v~~~~~~~~~~l~~~~~em~~r-~~~~~~~~~~~i~~---------~n~~~~~~~~~~~~~~~~~~~~~p~ivvviD 536 (744)
T Consensus 92 t--V~eNi~l~l~~~~~~~~~~~~~~~~~L~~vgl~~~~~~~p~~LSGGe~QRVAIARAL---------~~~P~i-llaD 159 (206)
T TIGR03608 92 T--VEENLDLALKYSKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAI---------LKPSEL-ILAD 159 (206)
T ss_pred C--HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHCCHHHHHHHHHHHHH---------HCCCCE-EEEC
T ss_conf 1--999999999865999999999999999986990565299244486999999999998---------249999-9963
Q ss_pred H-HHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf 5-68767531035899999999964201358999851654
Q gi|254780606|r 537 E-MADLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 537 E-~a~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 160 EPT~~LD~~~~~~i~~ll~~l~~~----g~tii~vTHd~~ 195 (206)
T TIGR03608 160 EPTGSLDPKNRDEVLDLLLELNDE----GKTIIIVTHDPE 195 (206)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHC----CCEEEEECCCHH
T ss_conf 998778999999999999999867----999999898789