HHsearch alignment for GI: 254780606 and conserved domain: cd00267

>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.94  E-value=0.086  Score=31.28  Aligned_cols=123  Identities=22%  Similarity=0.314  Sum_probs=60.5

Q ss_pred             CEEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEEC--CCCCEECCCCCCCCEEEEEEECHHHHHHH
Q ss_conf             7321120114846997078753447999999999985680110799972--34210001257752000044441787689
Q gi|254780606|r  403 ESVIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVD--PKMLELSVYDGIPHLLTPVVTNPKKAVMA  480 (744)
Q Consensus       403 ~~~~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD--~k~~~~~~~~~~ph~~~~v~~~~~~~~~~  480 (744)
T Consensus        16 ~~i~~~i~~Ge~~~i~G~nGaGKSTLl~~-l~gl~---~~~~G~i~~~g~~~~~~~~~~~~~--~-i~-~v~--------   79 (157)
T cd00267          16 DNVSLTLKAGEIVALVGPNGSGKSTLLRA-IAGLL---KPTSGEILIDGKDIAKLPLEELRR--R-IG-YVP--------   79 (157)
T ss_pred             EEEEEEECCCCEEEEECCCCCCHHHHHHH-HHCCC---CCCCCEEEECCEECCCCCHHHHHH--C-CC-CCC--------
T ss_conf             21178987997999987889998999999-95884---799628999999999799999994--0-60-876--------


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH-HHHHCCHHHHHHHHHHHHH
Q ss_conf             999998667699999980778679999988642026776665432338679998445687-6753103589999999996
Q gi|254780606|r  481 LKWAVREMEERYRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMAD-LMMVAGKEIEGAIQRLAQM  559 (744)
Q Consensus       481 l~~~~~em~~r~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~-l~~~~~~~~e~~~~~la~~  559 (744)
T Consensus        80 --QLSgGqkqrv~iA~al-----------~----------------~~p~-ililDEPtsgLD~~~~~~l~~~i~~l~~~  129 (157)
T cd00267          80 --QLSGGQRQRVALARAL-----------L----------------LNPD-LLLLDEPTSGLDPASRERLLELLRELAEE  129 (157)
T ss_pred             --CCCHHHHHHHHHHHHH-----------H----------------CCCC-EEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             --6886999999999999-----------7----------------0999-99996987668999999999999999968


Q ss_pred             HHCCEEEEEEEECCCC
Q ss_conf             4201358999851654
Q gi|254780606|r  560 ARAAGIHLIMATQRPS  575 (744)
Q Consensus       560 ~ra~GihlilatQrp~  575 (744)
T Consensus       130 ----g~tii~vtH~~~  141 (157)
T cd00267         130 ----GRTVIIVTHDPE  141 (157)
T ss_pred             ----CCEEEEEECCHH
T ss_conf             ----999999908999