HHsearch alignment for GI: 254780606 and conserved domain: cd03240

>cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.
Probab=93.00  E-value=0.41  Score=26.66  Aligned_cols=24  Identities=29%  Similarity=0.602  Sum_probs=18.4

Q ss_conf             484699707875344799999999
Q gi|254780606|r  412 MPHILVAGTTGSGKSVAINTMIMS  435 (744)
Q Consensus       412 ~PH~lvaG~TgsGKS~~l~~~i~s  435 (744)
T Consensus        22 ~~itaivG~NGaGKSTLl~~i~~~   45 (204)
T cd03240          22 SPLTLIVGQNGAGKTTIIEALKYA   45 (204)
T ss_conf             888999989999999999998630