HHsearch alignment for GI: 254780606 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=91.89 E-value=0.15 Score=29.70 Aligned_cols=36 Identities=28% Similarity=0.518 Sum_probs=25.7
Q ss_pred CCCEEECCH----HHCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 887321120----1148469970787534479999999999
Q gi|254780606|r 401 SGESVIADL----ANMPHILVAGTTGSGKSVAINTMIMSLL 437 (744)
Q Consensus 401 ~g~~~~~dl----~~~PH~lvaG~TgsGKS~~l~~~i~sl~ 437 (744)
T Consensus 14 ~~~~vL~~inl~i~~Ge~vaivG~sGsGKSTLl~l-l~gl~ 53 (229)
T cd03254 14 EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINL-LMRFY 53 (229)
T ss_pred CCCEEEECEEEEECCCCEEEEECCCCCHHHHHHHH-HHCCC
T ss_conf 89908746299987999999999999809999999-96686