HHsearch alignment for GI: 254780606 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.02 E-value=0.19 Score=28.87 Aligned_cols=152 Identities=15% Similarity=0.271 Sum_probs=68.1
Q ss_pred ECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEEC--CCC---CEE-------C-CCCCCCCEEE--EE
Q ss_conf 1120114846997078753447999999999985680110799972--342---100-------0-1257752000--04
Q gi|254780606|r 406 IADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVD--PKM---LEL-------S-VYDGIPHLLT--PV 470 (744)
Q Consensus 406 ~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD--~k~---~~~-------~-~~~~~ph~~~--~v 470 (744)
T Consensus 21 sl~i~~Ge~~~iiGpsGsGKSTLl~~-i~gl~---~p~~G~I~~~g~~i~~~~~~~l~~~R~~ig~vfQ-~~~l~~~ltV 95 (241)
T cd03256 21 SLSINPGEFVALIGPSGAGKSTLLRC-LNGLV---EPTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQ-QFNLIERLSV 95 (241)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHH-HHCCC---CCCCEEEEECCEECCCCCHHHHHHHHCCCEEECC-CCCCCCCCCH
T ss_conf 88999998999999998339999999-97499---9985599999999898998999998649189807-9978998899
Q ss_pred EECHHHHH----HHHHHH-----HHHHHHHHHHHHHCCCCCHHHH---------HHHHHHHHCCCCCCCCCCCCCCCEEE
Q ss_conf 44417876----899999-----9866769999998077867999---------99886420267766654323386799
Q gi|254780606|r 471 VTNPKKAV----MALKWA-----VREMEERYRKMSHLSVRNIKSY---------NERISTMYGEKPQGCGDDMRPMPYIV 532 (744)
Q Consensus 471 ~~~~~~~~----~~l~~~-----~~em~~r~~~~~~~~~~~i~~~---------n~~~~~~~~~~~~~~~~~~~~~p~iv 532 (744)
T Consensus 96 ~enV~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vgl~~~~~~~~~~LSGGq~QRVaIARA---------L~~~P~i- 165 (241)
T cd03256 96 LENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIARA---------LMQQPKL- 165 (241)
T ss_pred HHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH---------HHCCCCE-
T ss_conf 999863654133055776179959999999999997699778767844148028999999999---------8559998-
Q ss_pred EEHHHHH-HHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf 9844568-767531035899999999964201358999851654
Q gi|254780606|r 533 IIVDEMA-DLMMVAGKEIEGAIQRLAQMARAAGIHLIMATQRPS 575 (744)
Q Consensus 533 vviDE~a-~l~~~~~~~~e~~~~~la~~~ra~GihlilatQrp~ 575 (744)
T Consensus 166 ll~DEPts~LD~~~~~~i~~---ll~~l~~~~g~Tii~vtHdl~ 206 (241)
T cd03256 166 ILADEPVASLDPASSRQVMD---LLKRINREEGITVIVSLHQVD 206 (241)
T ss_pred EEECCCCCCCCHHHHHHHHH---HHHHHHHHCCCEEEEECCCHH
T ss_conf 99628766589999999999---999999851989999957989