HHsearch alignment for GI: 254780606 and conserved domain: cd03270

>cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=95.73  E-value=0.068  Score=31.99  Aligned_cols=29  Identities=31%  Similarity=0.437  Sum_probs=19.9

Q ss_conf             21120114846997078753447999999
Q gi|254780606|r  405 VIADLANMPHILVAGTTGSGKSVAINTMI  433 (744)
Q Consensus       405 ~~~dl~~~PH~lvaG~TgsGKS~~l~~~i  433 (744)
T Consensus        14 Vsl~i~~Ge~~aIvG~nGsGKSTL~~~~l   42 (226)
T cd03270          14 VDVDIPRNKLVVITGVSGSGKSSLAFDTI   42 (226)
T ss_conf             48998599899998789960989836166