HHsearch alignment for GI: 254780606 and conserved domain: cd03301

>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=96.71  E-value=0.014  Score=36.64  Aligned_cols=151  Identities=21%  Similarity=0.299  Sum_probs=79.0

Q ss_pred             ECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEEC-------CC----CCEECCCCCCCCEEEEEEECH
Q ss_conf             1120114846997078753447999999999985680110799972-------34----210001257752000044441
Q gi|254780606|r  406 IADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVD-------PK----MLELSVYDGIPHLLTPVVTNP  474 (744)
Q Consensus       406 ~~dl~~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD-------~k----~~~~~~~~~~ph~~~~v~~~~  474 (744)
T Consensus        20 sl~v~~Ge~~~i~GpSG~GKSTlLr~-iaGl~---~p~~G~I~~~g~~i~~~~~~~R~ig~VfQ~~~LfP~lt--V~eNI   93 (213)
T cd03301          20 NLDIADGEFVVLLGPSGCGKTTTLRM-IAGLE---EPTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMT--VYDNI   93 (213)
T ss_pred             EEEECCCCEEEEECCCCCHHHHHHHH-HHCCC---CCCCEEEEECCEECCCCCHHHCCEEEEECCCCCCCCCC--HHHHH
T ss_conf             77986998999999998809999999-97699---99863999999999999976788789945876465470--99999


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHCCCCCHHH---------HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHH-HHHHHH
Q ss_conf             787689999998667699-9999807786799---------99988642026776665432338679998445-687675
Q gi|254780606|r  475 KKAVMALKWAVREMEERY-RKMSHLSVRNIKS---------YNERISTMYGEKPQGCGDDMRPMPYIVIIVDE-MADLMM  543 (744)
Q Consensus       475 ~~~~~~l~~~~~em~~r~-~~~~~~~~~~i~~---------~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE-~a~l~~  543 (744)
T Consensus        94 ~~~l~~~~~~~~e~~~~v~~~l~~~gl~~~~~~~P~~LSGGqkQRVaiARAl~---------~~P~lL-LlDEP~saLD~  163 (213)
T cd03301          94 AFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIV---------REPKVF-LMDEPLSNLDA  163 (213)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHCCHHHHHHHHHHHHHH---------CCCCEE-EECCCCCCCCH
T ss_conf             98999859998999999999998759924650995569999999999999987---------599989-98388764298


Q ss_pred             HCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf             31035899999999964201358999851654
Q gi|254780606|r  544 VAGKEIEGAIQRLAQMARAAGIHLIMATQRPS  575 (744)
Q Consensus       544 ~~~~~~e~~~~~la~~~ra~GihlilatQrp~  575 (744)
T Consensus       164 ~~r---~~i~~~l~~~~~~~~~T~i~vTHd~~  192 (213)
T cd03301         164 KLR---VQMRAELKRLQQRLGTTTIYVTHDQV  192 (213)
T ss_pred             HHH---HHHHHHHHHHHHHHCCEEEEECCCHH
T ss_conf             999---99999999999974998999999989