HHsearch alignment for GI: 254780606 and conserved domain: pfam09397
>pfam09397 Ftsk_gamma Ftsk gamma domain. This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.
Probab=99.89 E-value=5.4e-24 Score=183.54 Aligned_cols=65 Identities=51% Similarity=0.802 Sum_probs=61.9
Q ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEC
Q ss_conf 77766038999999997498623220000010078999999999987975702168862321103
Q gi|254780606|r 678 KKERSNLYAKAVDLVIDNQRCSTSFIQRRLQIGYNRAALLVERMEQEGLVSEADHVGKRHVFSEK 742 (744)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~s~s~~qr~~~~g~~ra~~~~~~~e~~g~~~~~~~~~~r~~~~~~ 742 (744)
T Consensus 2 ~~~~D~l~~~a~~~V~~~~~~S~S~lQR~~~IGynRAariid~LE~~GiVsp~~g~~~ReVL~~~ 66 (67)
T pfam09397 2 DEEEDELYDEAVEFVIETQKASTSLLQRRLRIGYNRAARLIEQMEEEGIVGPANGSKPREVLVPK 66 (67)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC
T ss_conf 74203899999999998186348999999710506999999999998488887789885050899