RPSBLAST alignment for GI: 254780606 and conserved domain: cd01127
>gnl|CDD|29993 cd01127, TrwB, Bacterial conjugation protein TrwB, ATP binding domain. TrwB is a homohexamer encoded by conjugative plasmids in Gram-negative bacteria. TrwB also has an all alpha domain which has been hypothesized to be responsible for DNA binding. TrwB is a component of Type IV secretion and is responsible for the horizontal transfer of DNA between bacteria.. Length = 410
Score = 40.3 bits (94), Expect = 0.002
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 399 TISGESVIADLANMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDP 452
TI+G D H ++ GTTG+GK+ I ++ S+ R R D R I+ DP
Sbjct: 30 TIAGLPFPKDAEEA-HTMIIGTTGTGKTTQIRELLASI--RARGD--RAIIYDP 78