HHsearch alignment for GI: 254780608 and conserved domain: CHL00113
>CHL00113 rps4 ribosomal protein S4; Reviewed.
Probab=97.56 E-value=5.9e-05 Score=51.32 Aligned_cols=52 Identities=17% Similarity=0.225 Sum_probs=43.5
Q ss_pred CCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEEC-CCCCCCCCCEEEEECC
Q ss_conf 668999998767889899999998499038878845-1121179988999356
Q gi|254780608|r 19 MRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQVVRIPPV 70 (346)
Q Consensus 19 ~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD~I~i~~~ 70 (346)
T Consensus 89 ~RLDnvVyRlGfA~Tr~~ARQlV~HgHi~VNgkkVnIPSy~vk~GDvI~v~~k 141 (201)
T CHL00113 89 MRLDNILFRLGMAPTIPAARQLVNHGHILVNGRIVDIPSYRCKPRDIITIKDK 141 (201)
T ss_pred HHHHHHHHHCCCCCCHHHHHHEEECCEEEECCEEECCCCEEEECCCEEEECCC
T ss_conf 99999998705405888761058466299899893378758427998997534