HHsearch alignment for GI: 254780608 and conserved domain: CHL00113

>CHL00113 rps4 ribosomal protein S4; Reviewed.
Probab=97.56  E-value=5.9e-05  Score=51.32  Aligned_cols=52  Identities=17%  Similarity=0.225  Sum_probs=43.5

Q ss_pred             CCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEEC-CCCCCCCCCEEEEECC
Q ss_conf             668999998767889899999998499038878845-1121179988999356
Q gi|254780608|r   19 MRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQVVRIPPV   70 (346)
Q Consensus        19 ~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD~I~i~~~   70 (346)
T Consensus        89 ~RLDnvVyRlGfA~Tr~~ARQlV~HgHi~VNgkkVnIPSy~vk~GDvI~v~~k  141 (201)
T CHL00113         89 MRLDNILFRLGMAPTIPAARQLVNHGHILVNGRIVDIPSYRCKPRDIITIKDK  141 (201)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHEEECCEEEECCEEECCCCEEEECCCEEEECCC
T ss_conf             99999998705405888761058466299899893378758427998997534