HHsearch alignment for GI: 254780608 and conserved domain: PRK05327
>PRK05327 rpsD 30S ribosomal protein S4; Validated.
Probab=97.28 E-value=0.00024 Score=47.50 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=43.3
Q ss_pred CCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEEC-CCCCCCCCCEEEEECC
Q ss_conf 668999998767889899999998499038878845-1121179988999356
Q gi|254780608|r 19 MRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQVVRIPPV 70 (346)
Q Consensus 19 ~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD~I~i~~~ 70 (346)
T Consensus 92 ~RLD~vv~r~g~a~t~~~ARQ~v~Hghi~vNg~~v~ips~~~k~gd~i~vkek 144 (201)
T PRK05327 92 RRLDNVVYRLGFAPTRAQARQLVSHGHILVNGKKVNIPSYQVKPGDVIEVREK 144 (201)
T ss_pred HHHHHHHHHHCCCCCHHHHHHEEEEEEEEECCEEECCCCEECCCCCEEEECCC
T ss_conf 99889998714105888862006440599899983578747389999997700