HHsearch alignment for GI: 254780608 and conserved domain: TIGR00478

>TIGR00478 tly hemolysin A; InterPro: IPR004538 Hemolysins are exotoxins that attack blood cell membranes and cause cell rupture. The mechanism of action is not well defined. Hemolysin A is induced by sodium ribonucleate, and is produced by pathogenic bacterial strains. Hemolysin A from Treponema hyodysenteriae causes swine dysentry.; GO: 0003723 RNA binding, 0019836 hemolysis by symbiont of host red blood cells.
Probab=97.15  E-value=0.00057  Score=45.11  Aligned_cols=51  Identities=20%  Similarity=0.223  Sum_probs=45.8

Q ss_pred             CHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEE-CCCCCCCCCCEEEEECC
Q ss_conf             6899999876788989999999849903887884-51121179988999356
Q gi|254780608|r   20 RLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSGQVVRIPPV   70 (346)
Q Consensus        20 RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~v-k~~~~v~~GD~I~i~~~   70 (346)
T Consensus         1 RLD~lLv~rgl~~sR~~Ak~lI~kG~V~VN~~~v~KP~~~v~~~~~i~l~~~   52 (240)
T TIGR00478         1 RLDILLVKRGLVESREKAKRLILKGEVLVNKKKVDKPSALVDKDAKIELVQN   52 (240)
T ss_pred             CCHHHHHHHCHHHHHHHHHHHHHCCCEEECCEEECCCCCEECCCCCEEEECC
T ss_conf             9036776501145789999998739455557652088604416760344147