HHsearch alignment of GI: 254780608 and MMDB domain: 1sgv_A_1-60_206-232
>1sgv_A (A:1-60,A:206-232) TRNA pseudouridine synthase B; hinged motion, tRNA modification, structural genomics, PSI, protein structure initiative; 1.90A {Mycobacterium tuberculosis H37RV}
Probab=92.49 E-value=0.057 Score=32.08 Aligned_cols=53 Identities=26% Similarity=0.426 Sum_probs=36.8
Q ss_pred CCCEEEECCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCH
Q ss_conf 78568841765311223578533233201101111100133354453422240462123101
Q gi|254780608|r 105 DSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAA 166 (346)
Q Consensus 105 D~~livinKPaGl~vhp~~g~~~~~~~~l~~~~~~~~~~~~lVHRLDr~TSGlll~AK~~~a 166 (346)
-+.|++||||.|+.+|. +...+....+ ..+.+-..-||-..||+|+++-.+.+
T Consensus 5 ~~Gil~idKP~G~TS~~-------vv~~iKk~l~--~kKVGH~GTLDP~AtGvLiv~iG~aT 57 (87)
T 1sgv_A 5 GPGIVVIDKPAGMTSHD-------VVGRCRRIFA--TRRVGHAGTLDPMATGVLVIGIERAT 57 (87)
T ss_dssp CSEEEEEEECTTCCHHH-------HHHHHHHHTT--CSCEEESSCCCTTCEEEEEEEEGGGG
T ss_pred CCEEEEEECCCCCCHHH-------HHHHHHHHHC--CCCCCCCCCCCCCCEEEEEEEECHHH
T ss_conf 98899997699899899-------9999999848--88556387889736423999989676