HHsearch alignment of GI: 254780608 and MMDB domain: 3dh3_A_1-63

>3dh3_A (A:1-63) Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli}

Probab=99.03  E-value=2.9e-10  Score=84.37  Aligned_cols=54  Identities=17%  Similarity=0.401  Sum_probs=50.1

Q ss_pred             HHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEECCCCCCCCCCEEEEEC
Q ss_conf             1368668999998767889899999998499038878845112117998899935
Q gi|254780608|r   15 DEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPP   69 (346)
Q Consensus        15 ~~~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk~~~~v~~GD~I~i~~   69 (346)
                      +++++|||+||+..+ +.||++++++|++|.|+|||++++++++|..||.|.+..
T Consensus         3 ~~~~~RLDk~La~~~-~~SR~~~~~li~~G~V~Vng~~vk~~~~v~~~d~I~v~~   56 (63)
T 3dh3_A            3 PDSSVRLNKYISESG-ICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNG   56 (63)
T ss_dssp             -CCCEEHHHHHHTTT-SSCHHHHHHHHHTTCEEETTEECCTTCEECTTCCEEETT
T ss_pred             CCCCCCHHHHHHHCC-CCCHHHHHHHHHCCCEEECCEECCCCCCCCCCCEEEECC
T ss_conf             988704999998778-851999999998793898999947888969999899999