HHsearch results for GI: 254780608 and protein with PDBid: 2cqj_A
>2cqj_A BRMS2, U3 small nucleolar ribonucleoprotein protein IMP3 homolog; S4 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.60 E-value=0.00087 Score=42.56 Aligned_cols=55 Identities=15% Similarity=0.091 Sum_probs=45.5
Q ss_pred HHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEE-CCCCCCCCC--CEEEEE
Q ss_conf 1136866899999876788989999999849903887884-511211799--889993
Q gi|254780608|r 14 NDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSG--QVVRIP 68 (346)
Q Consensus 14 ~~~~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~v-k~~~~v~~G--D~I~i~ 68 (346)
...+++|||.+|.+.-=.-|..+.+++|..|.|+|||+++ .|++.|..+ |.|.+.
T Consensus 3 ~~~~~RRLd~il~r~~fa~S~~~ARqlI~HghI~Vng~~V~~Ps~lV~~~~Ed~It~~ 60 (71)
T 2cqj_A 3 SGSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWV 60 (71)
T ss_dssp SSCCEEEHHHHHHHTTCSSSHHHHHHHHHTTCEEETTBCCCCTTCEEEHHHHTTEEES
T ss_pred CCHHHCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCEEECCCCCCEEEEE
T ss_conf 3032301378998826537899999997669599999996579769538988769996