HHsearch results for GI: 254780608 and protein with PDBid: 2cqj_A

>2cqj_A BRMS2, U3 small nucleolar ribonucleoprotein protein IMP3 homolog; S4 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.60  E-value=0.00087  Score=42.56  Aligned_cols=55  Identities=15%  Similarity=0.091  Sum_probs=45.5

Q ss_pred             HHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEE-CCCCCCCCC--CEEEEE
Q ss_conf             1136866899999876788989999999849903887884-511211799--889993
Q gi|254780608|r   14 NDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSG--QVVRIP   68 (346)
Q Consensus        14 ~~~~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~v-k~~~~v~~G--D~I~i~   68 (346)
                      ...+++|||.+|.+.-=.-|..+.+++|..|.|+|||+++ .|++.|..+  |.|.+.
T Consensus         3 ~~~~~RRLd~il~r~~fa~S~~~ARqlI~HghI~Vng~~V~~Ps~lV~~~~Ed~It~~   60 (71)
T 2cqj_A            3 SGSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWV   60 (71)
T ss_dssp             SSCCEEEHHHHHHHTTCSSSHHHHHHHHHTTCEEETTBCCCCTTCEEEHHHHTTEEES
T ss_pred             CCHHHCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCEEECCCCCCEEEEE
T ss_conf             3032301378998826537899999997669599999996579769538988769996