HHsearch results for GI: 254780608 and protein with PDBid: 2k6p_A

>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=99.54  E-value=7.6e-16  Score=118.59  Aligned_cols=88  Identities=14%  Similarity=0.160  Sum_probs=71.1

Q ss_pred             CCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             66899999876788989999999849903887884511211799889993565542223322223455433432223454
Q gi|254780608|r   19 MRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLK   98 (346)
Q Consensus        19 ~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk~~~~v~~GD~I~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (346)
                      ||||+||...+...||+.++++|++|.|+|||+.++++++|+.||.|.+........              ....+....
T Consensus         1 mRlDk~L~~~~~~~SRs~~~~lI~~G~V~vng~~~k~s~~V~~Gd~i~i~~~~~~~~--------------~~v~~i~~~   66 (92)
T 2k6p_A            1 MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAKASKEVKAGDTISLHYLKGIEE--------------YTILQIPAL   66 (92)
T ss_dssp             CBHHHHSTTTTSCCCCCSSCCHHHHTCCEETTEECCTTCBCCTTCEEEECCSSCCEE--------------EEECCCCCC
T ss_pred             CCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEEEECCEECCCCEEEEEECCCCEE--------------EEEEECCCC
T ss_conf             977899987377379999999998892897999975236827999999983897079--------------999978865


Q ss_pred             CEEEEECCCEEEECCCCCCEEE
Q ss_conf             3078617856884176531122
Q gi|254780608|r   99 SILLYEDSKIYVFNKPAGISVQ  120 (346)
Q Consensus        99 ~~IiyED~~livinKPaGl~vh  120 (346)
                      ..|+|||++++++|||+||--|
T Consensus        67 ~~i~~ED~~l~ii~K~~~le~~   88 (92)
T 2k6p_A           67 KNVPRKDTHLYIAPKTKELEHH   88 (92)
T ss_dssp             SCCCSSSTTSSEEECCCC----
T ss_pred             CCCCHHHHCCCEECCHHCCCCC
T ss_conf             7985255182698060046344