HHsearch results for GI: 254780608 and protein with PDBid: 2k6p_A
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=99.54 E-value=7.6e-16 Score=118.59 Aligned_cols=88 Identities=14% Similarity=0.160 Sum_probs=71.1
Q ss_pred CCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66899999876788989999999849903887884511211799889993565542223322223455433432223454
Q gi|254780608|r 19 MRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLK 98 (346)
Q Consensus 19 ~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk~~~~v~~GD~I~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (346)
||||+||...+...||+.++++|++|.|+|||+.++++++|+.||.|.+........ ....+....
T Consensus 1 mRlDk~L~~~~~~~SRs~~~~lI~~G~V~vng~~~k~s~~V~~Gd~i~i~~~~~~~~--------------~~v~~i~~~ 66 (92)
T 2k6p_A 1 MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAKASKEVKAGDTISLHYLKGIEE--------------YTILQIPAL 66 (92)
T ss_dssp CBHHHHSTTTTSCCCCCSSCCHHHHTCCEETTEECCTTCBCCTTCEEEECCSSCCEE--------------EEECCCCCC
T ss_pred CCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEEEECCEECCCCEEEEEECCCCEE--------------EEEEECCCC
T ss_conf 977899987377379999999998892897999975236827999999983897079--------------999978865
Q ss_pred CEEEEECCCEEEECCCCCCEEE
Q ss_conf 3078617856884176531122
Q gi|254780608|r 99 SILLYEDSKIYVFNKPAGISVQ 120 (346)
Q Consensus 99 ~~IiyED~~livinKPaGl~vh 120 (346)
..|+|||++++++|||+||--|
T Consensus 67 ~~i~~ED~~l~ii~K~~~le~~ 88 (92)
T 2k6p_A 67 KNVPRKDTHLYIAPKTKELEHH 88 (92)
T ss_dssp SCCCSSSTTSSEEECCCC----
T ss_pred CCCCHHHHCCCEECCHHCCCCC
T ss_conf 7985255182698060046344