HHSEARCH alignment of GI: 254780608 and SCOP domain: d1dm9a_

Alignment

Probab=98.63  E-value=3.8e-08  Score=68.53  Aligned_cols=54  Identities=15%  Similarity=0.244  Sum_probs=46.5

Q ss_pred             CCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEECCCCCCCCCCEEEEECC
Q ss_conf             686689999987678898999999984990388788451121179988999356
Q gi|254780608|r   17 ENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPPV   70 (346)
Q Consensus        17 ~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk~~~~v~~GD~I~i~~~   70 (346)
                      +.||||+||-..--.-||+.++++|.+|.|+|||+++|+++.|+.||+|.|...
T Consensus         3 ~~mRlD~~L~~~r~~ktR~~A~~~i~~G~V~vNg~~vKps~~vk~GDvI~i~~~   56 (104)
T d1dm9a_           3 VEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQG   56 (104)
T ss_dssp             TCCBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCTTCBCCTTCEEEEEET
T ss_pred             CCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCCCEEEEEEC
T ss_conf             637689999982217209999999983971548741455556899999999868

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Heat shock protein 15 kD
domain: Heat shock protein 15 kD
species: Escherichia coli [TaxId: 562]