HHSEARCH alignment of GI: 254780608 and SCOP domain: d1jh3a_

Alignment

Probab=92.41  E-value=0.18  Score=26.47  Aligned_cols=52  Identities=12%  Similarity=0.144  Sum_probs=35.9

Q ss_pred             EEECHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEEC-CCCCCCCCC
Q ss_conf             998411368668999998767889899999998499038878845-112117998
Q gi|254780608|r   10 VVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQ   63 (346)
Q Consensus        10 ~~V~~~~~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD   63 (346)
                      +.+..  ++..|-.+|...==--|++..+++|++|.|+|||+++. +++.+...|
T Consensus        25 ~~~~~--~~~~l~~ll~~~~l~~S~seaRrlI~~ggv~iN~~kv~d~~~~l~~~~   77 (99)
T d1jh3a_          25 FVHEG--GDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEH   77 (99)
T ss_dssp             EEECS--SCCCHHHHHHHHTSCCSHHHHHHHHHSTTEEETTEECCSTTTCCSSTT
T ss_pred             EEECC--CCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCCCCHHH
T ss_conf             79658--998799999984887688999999985998999999328122017757

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
domain: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]