BLAST/PSIBLAST alignment of GI: 254780608 and GI: 15965142 at iteration 1
>gi|15965142|ref|NP_385495.1| ribosomal large subunit pseudouridine synthase C protein [Sinorhizobium meliloti 1021] Length = 330
>gi|307314392|ref|ZP_07593998.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti BL225C] Length = 330
>gi|307322745|ref|ZP_07602066.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti AK83] Length = 330
>gi|15074322|emb|CAC45968.1| Probable ribosomal large subunit pseudouridine synthase C [Sinorhizobium meliloti 1021] Length = 330
>gi|306891605|gb|EFN22470.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti AK83] Length = 330
>gi|306899090|gb|EFN29732.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti BL225C] Length = 330
Score = 361 bits (927), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 165/322 (51%), Positives = 229/322 (71%), Gaps = 2/322 (0%)
Query: 4 MTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQ 63
M +++ V++DE MRLDRWFK H+P + F LQK+LRSGQ+RVD R K + RIQ GQ
Sbjct: 1 MAGIEHRQVDSDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQIRVDGARAKSDTRIQPGQ 60
Query: 64 VVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGS 123
+RIPP + K I + + + L ++L+ED+K+ V NKPAG++VQGGS
Sbjct: 61 TIRIPP-LGVDPKEAKSGPIGGRDLRQSPDGELLSRMVLHEDAKVIVLNKPAGLAVQGGS 119
Query: 124 GIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIY 183
G+ HID L++W KG+KPRL HRLD++TSG+LVVARTR AAQ LT +FR R +K Y
Sbjct: 120 GVNRHIDKMLEAWTSQKGEKPRLVHRLDRDTSGVLVVARTRGAAQQLTAAFRERDTKKTY 179
Query: 184 WSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWL 243
W+LV G+P+ +++ I+ WL+K+ GD V + K E GA++AIS++++++ Q WL
Sbjct: 180 WALVRGVPRKREDKISTWLVKEPTPDGDRVRIAKHGEDGADHAISYYRIVEQAGQNLAWL 239
Query: 244 EMQPHTGRTHQLRVHALHMGCPIVGDHKYC-ANFKGNFTSPIQNKLYLHARYMDLPHPEG 302
EM+P+TGRTHQLRVHA H+G PI+GD KY A+ F +QN+L+LHAR++D+PHP G
Sbjct: 240 EMEPYTGRTHQLRVHAAHIGHPIIGDPKYFEADVNWTFPGGMQNRLHLHARHIDIPHPNG 299
Query: 303 GRLQITAPLPAHMVKTWDSLGF 324
GRL+ITAPLP HMV++W+ LGF
Sbjct: 300 GRLKITAPLPQHMVQSWNLLGF 321