BLAST/PSIBLAST alignment of GI: 254780608 and GI: 241204807 at iteration 1
>gi|241204807|ref|YP_002975903.1| pseudouridine synthase, RluA family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 330
>gi|240858697|gb|ACS56364.1| pseudouridine synthase, RluA family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 330
 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 171/324 (52%), Positives = 234/324 (72%), Gaps = 7/324 (2%)

Query: 4   MTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQ 63
           M  ++++ VE DE  MRLDRWFK H+P + F  LQK+LRSGQVRVD  RVK + R+Q GQ
Sbjct: 1   MAGIEHIKVEPDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQVRVDGGRVKSDARVQPGQ 60

Query: 64  VVRIPPVINALNHIIKEQKILDSSVNLTKHSDF--LKSILLYEDSKIYVFNKPAGISVQG 121
            VR+PP+   ++  +K   I  +  +L   SDF  L  ++L+ED K+ V NKP G++VQG
Sbjct: 61  TVRVPPM--DVDAKLKSGPI--AGKDLKHSSDFQLLSRMVLHEDDKVIVLNKPPGLAVQG 116

Query: 122 GSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQK 181
           GSG+A HID  L++W   KG+KPRL HRLD++TSG+LV+ARTR AAQ LT +FR R  +K
Sbjct: 117 GSGVARHIDQMLEAWTSPKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKK 176

Query: 182 IYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFC 241
            YW+LV G+P+  ++ I+ WL+K+    GD + + K  E GA++AIS ++V++  AQ   
Sbjct: 177 TYWALVKGVPRKHEDKISTWLVKEPTADGDRMRIAKHGEDGADHAISFYRVLETAAQNLA 236

Query: 242 WLEMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKG-NFTSPIQNKLYLHARYMDLPHP 300
           WLEM+P+TGRTHQLRVHALH+G PI+GD KY  +    +F   +Q KL+LHAR++D+PHP
Sbjct: 237 WLEMEPYTGRTHQLRVHALHIGHPIIGDPKYFDDDPNWDFPGGVQKKLHLHARHIDIPHP 296

Query: 301 EGGRLQITAPLPAHMVKTWDSLGF 324
            GGRL+I+APLPAHMV+TW+ LG 
Sbjct: 297 SGGRLRISAPLPAHMVQTWNLLGL 320