BLAST/PSIBLAST alignment of GI: 254780608 and GI: 325292801 at iteration 1
>gi|325292801|ref|YP_004278665.1| ribosomal large subunit pseudouridine synthase C [Agrobacterium sp. H13-3] Length = 329
>gi|325060654|gb|ADY64345.1| ribosomal large subunit pseudouridine synthase C [Agrobacterium sp. H13-3] Length = 329
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/322 (54%), Positives = 235/322 (72%), Gaps = 3/322 (0%)
Query: 4 MTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQ 63
M ++++ VE DE MRLDRWFK HYP + F LQK+LRSGQVRVD RVK + R+Q GQ
Sbjct: 1 MAGIEHIKVEADEAGMRLDRWFKIHYPGLGFGQLQKLLRSGQVRVDGGRVKTDARVQPGQ 60
Query: 64 VVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGS 123
+VR+PPV + L +K I + + + L +LL+ED K+ VFNKPAGI+VQGGS
Sbjct: 61 MVRVPPVDSDLK--VKSGPIGSRDLKHSADGELLARMLLHEDDKVLVFNKPAGIAVQGGS 118
Query: 124 GIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIY 183
G+ HIDG L++W KG+KPRL HRLD++TSG+LVVARTR AAQ LT +FR R +K Y
Sbjct: 119 GVNRHIDGLLEAWTSPKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTY 178
Query: 184 WSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWL 243
W+LV G+P+ ++ I+ WL+K+ GD + + K E+GA++AIS+++VID AQ WL
Sbjct: 179 WALVRGVPRKHQDKISTWLVKEQTPDGDRMRIAKHGEEGADHAISYYRVIDTAAQNLAWL 238
Query: 244 EMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKG-NFTSPIQNKLYLHARYMDLPHPEG 302
EM+P+TGRTHQLRVHALHMG PI+GD KY + +F +Q +L+LHAR++D+PHP G
Sbjct: 239 EMEPYTGRTHQLRVHALHMGHPIIGDPKYYIDDPNWDFPGGVQKRLHLHARHIDIPHPNG 298
Query: 303 GRLQITAPLPAHMVKTWDSLGF 324
GRL+++APLP HMV+TW+ LG
Sbjct: 299 GRLRVSAPLPPHMVQTWNLLGL 320