BLAST/PSIBLAST alignment of GI: 254780608 and GI: 327191042 at iteration 1

>gi|327191042|gb|EGE58095.1| RNA-pseudouridine synthase protein, ribosomal large subunit C [Rhizobium etli CNPAF512] Length = 330

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 166/322 (51%), Positives = 231/322 (71%), Gaps = 3/322 (0%)

Query: 4   MTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQ 63
           M  ++++ VE DE  MRLDRWFK H+P + F  LQK+LRSGQVRVD  RVK + R+Q GQ
Sbjct: 1   MAGIEHIKVEPDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQVRVDGGRVKSDARVQPGQ 60

Query: 64  VVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGS 123
            VR+PP+   ++  +K   I    +  +   + L  ++L+ED K+ V NKP GI+VQGGS
Sbjct: 61  TVRVPPL--DVDAKLKSGPIAGKDLKHSSDFELLSRMVLHEDDKVIVLNKPPGIAVQGGS 118

Query: 124 GIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIY 183
           G+A HID  L++W   KG+KPRL HRLD++TSG+LV+ARTR AAQ LT +FR R  +K Y
Sbjct: 119 GVARHIDQMLEAWTSPKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKKTY 178

Query: 184 WSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWL 243
           W+LV G+P+  ++ I+ WL+K++   GD + + K  E GA++AIS ++V++  AQ   W+
Sbjct: 179 WALVKGVPRKHEDKISTWLVKEATADGDRMRIAKHGEDGADHAISFYRVLETAAQNLAWI 238

Query: 244 EMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKG-NFTSPIQNKLYLHARYMDLPHPEG 302
           EM+P+TGRTHQLRVHALH+G PI+GD KY  +    +F   IQ KL+LHAR++D+PHP G
Sbjct: 239 EMEPYTGRTHQLRVHALHIGHPIIGDPKYFDDDPNWDFPGGIQKKLHLHARHIDIPHPSG 298

Query: 303 GRLQITAPLPAHMVKTWDSLGF 324
           GRL+++APLP HMV+TW+ LG 
Sbjct: 299 GRLRVSAPLPPHMVQTWNLLGL 320