PSIBLAST alignment of GI: 254780608 and protein with PDB id: 1v9f

>gi|49259508|pdb|1V9F|A Chain A, Crystal Structure Of Catalytic Domain Of Pseudouridine Synthase Rlud From Escherichia Coli Length = 325
>gi|118138510|pdb|2IST|A Chain A, Crystal Structure Of Rlud From E. Coli Length = 325
 Score =  183 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 130/331 (39%), Gaps = 35/331 (10%)

Query: 11  VVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSGQVVRIPP 69
            V  ++   RLD+     +P  +   +++ +   +V V+ K   K   ++  G+ V I  
Sbjct: 9   TVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINA 68

Query: 70  VINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGSGIAYHI 129
            I                         +   ++YED  I + NKP  + V  G+G     
Sbjct: 69  EIEEEARF---------------EPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGT 113

Query: 130 DGF---LKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSL 186
                       +   +  + HRLD++T+G++VVA+T  A   L ES + R I + Y ++
Sbjct: 114 VLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAV 173

Query: 187 VWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQ 246
             G                                    A++H+++++ F      L ++
Sbjct: 174 AIGHMTAGGTVDE------PISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRV-HTRLRLR 226

Query: 247 PHTGRTHQLRVHALHMGCPIVGDHKYCANFKGNF--------TSPIQNKLYLHARYMDLP 298
             TGRTHQ+RVH  H+  P+VGD  Y    +           T    ++  LHA  + L 
Sbjct: 227 LETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLY 286

Query: 299 HPEGG-RLQITAPLPAHMVKTWDSLGFKYDR 328
           HP  G  ++  AP+P  MV+  + +   ++ 
Sbjct: 287 HPISGIEMEWHAPIPQDMVELIEVMRADFEE 317