RPSBLAST alignment for GI: 254780608 and conserved domain: PRK11025
>gnl|CDD|182909 PRK11025, PRK11025, 23S rRNA pseudouridylate synthase C; Provisional. Length = 317
Score = 175 bits (446), Expect = 1e-44
Identities = 109/312 (34%), Positives = 173/312 (55%), Gaps = 16/312 (5%)
Query: 7 VQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVR 66
V+ V + DE R+D + + + + +ILR G+VRV+KKR+K ++++G VR
Sbjct: 8 VKIVTISADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVR 67
Query: 67 IPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGSGIA 126
IPPV A E++ S L K + L ++LYED I V NKP+G +V GGSG++
Sbjct: 68 IPPVRVA------EREEEAVSPKLQKVAA-LADVILYEDDHILVLNKPSGTAVHGGSGLS 120
Query: 127 YHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSL 186
+ + L++ + + + L HRLD++TSG+L+VA+ R+A + L E R + +QK Y +L
Sbjct: 121 FGVIEGLRA-LRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLAL 179
Query: 187 VWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWL-EM 245
V G ++ + + LLK G+ +V+ +++G + + FKV + +A F L
Sbjct: 180 VRGQWQSHVKVVQAPLLKNILQSGE--RIVRVSQEGKP-SETRFKVEERYA--FATLVRA 234
Query: 246 QPHTGRTHQLRVHALHMGCPIVGDHKYC-ANFKGNFTSPIQNKLYLHARYMDLPHPEGG- 303
P TGRTHQ+RVH + G PI D +Y F T N+L+LHA + HP G
Sbjct: 235 SPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDQQLTGTGLNRLFLHAAALKFTHPGTGE 294
Query: 304 RLQITAPLPAHM 315
++I APL +
Sbjct: 295 VMRIEAPLDEQL 306