RPSBLAST alignment for GI: 254780608 and conserved domain: PRK11025

>gnl|CDD|182909 PRK11025, PRK11025, 23S rRNA pseudouridylate synthase C; Provisional. Length = 317
 Score =  175 bits (446), Expect = 1e-44
 Identities = 109/312 (34%), Positives = 173/312 (55%), Gaps = 16/312 (5%)

Query: 7   VQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVR 66
           V+ V +  DE   R+D + +     +    + +ILR G+VRV+KKR+K   ++++G  VR
Sbjct: 8   VKIVTISADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVR 67

Query: 67  IPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGSGIA 126
           IPPV  A      E++    S  L K +  L  ++LYED  I V NKP+G +V GGSG++
Sbjct: 68  IPPVRVA------EREEEAVSPKLQKVAA-LADVILYEDDHILVLNKPSGTAVHGGSGLS 120

Query: 127 YHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSL 186
           + +   L++ +  + +   L HRLD++TSG+L+VA+ R+A + L E  R + +QK Y +L
Sbjct: 121 FGVIEGLRA-LRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLAL 179

Query: 187 VWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWL-EM 245
           V G  ++  + +   LLK     G+   +V+ +++G   + + FKV + +A  F  L   
Sbjct: 180 VRGQWQSHVKVVQAPLLKNILQSGE--RIVRVSQEGKP-SETRFKVEERYA--FATLVRA 234

Query: 246 QPHTGRTHQLRVHALHMGCPIVGDHKYC-ANFKGNFTSPIQNKLYLHARYMDLPHPEGG- 303
            P TGRTHQ+RVH  + G PI  D +Y    F    T    N+L+LHA  +   HP  G 
Sbjct: 235 SPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDQQLTGTGLNRLFLHAAALKFTHPGTGE 294

Query: 304 RLQITAPLPAHM 315
            ++I APL   +
Sbjct: 295 VMRIEAPLDEQL 306