RPSBLAST alignment for GI: 254780608 and conserved domain: PRK11112

>gnl|CDD|182971 PRK11112, PRK11112, tRNA pseudouridine synthase C; Provisional. Length = 257
 Score = 99.4 bits (248), Expect = 1e-21
 Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 63/247 (25%)

Query: 101 LLYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSK-------------GQKPRLT 147
           +LY+D  +   NKPAG  V              +SW+D               GQ     
Sbjct: 4   ILYQDEWLVAVNKPAGWLVH-------------RSWLDRHETVFVMQTVRDQIGQHVFTA 50

Query: 148 HRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSH 207
           HRLD+ TSG+L++A +   A+ L + F   +IQK Y ++V G           WL++++ 
Sbjct: 51  HRLDRPTSGVLLMALSSEVARLLAQQFEQHQIQKTYHAIVRG-----------WLMEEAV 99

Query: 208 IGGDYVHVVK---------QNEKGANYAISHFKV---------IDCFA-QKFCWLEMQPH 248
           +  DY    +         + +K    A++H++             +   ++  +E++P 
Sbjct: 100 L--DYPLKEELDKIADKFAREDKAPQPAVTHYRGLATVEMPVATGRYPTTRYSLVELEPK 157

Query: 249 TGRTHQLRVHALHMGCPIVGDHKYCANFKGN--FTSPIQ-NKLYLHARYMDLPHP-EGGR 304
           TGR HQLR H  H+  PI+GD K+  + + N         ++L LHA  + L HP  G  
Sbjct: 158 TGRKHQLRRHMAHLRHPIIGDTKH-GDLRQNRSLAEHFGCSRLMLHASELSLTHPFTGEP 216

Query: 305 LQITAPL 311
           L ITA L
Sbjct: 217 LTITAGL 223