RPSBLAST alignment for GI: 254780608 and conserved domain: PRK11112
>gnl|CDD|182971 PRK11112, PRK11112, tRNA pseudouridine synthase C; Provisional. Length = 257
Score = 99.4 bits (248), Expect = 1e-21
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 63/247 (25%)
Query: 101 LLYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSK-------------GQKPRLT 147
+LY+D + NKPAG V +SW+D GQ
Sbjct: 4 ILYQDEWLVAVNKPAGWLVH-------------RSWLDRHETVFVMQTVRDQIGQHVFTA 50
Query: 148 HRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSH 207
HRLD+ TSG+L++A + A+ L + F +IQK Y ++V G WL++++
Sbjct: 51 HRLDRPTSGVLLMALSSEVARLLAQQFEQHQIQKTYHAIVRG-----------WLMEEAV 99
Query: 208 IGGDYVHVVK---------QNEKGANYAISHFKV---------IDCFA-QKFCWLEMQPH 248
+ DY + + +K A++H++ + ++ +E++P
Sbjct: 100 L--DYPLKEELDKIADKFAREDKAPQPAVTHYRGLATVEMPVATGRYPTTRYSLVELEPK 157
Query: 249 TGRTHQLRVHALHMGCPIVGDHKYCANFKGN--FTSPIQ-NKLYLHARYMDLPHP-EGGR 304
TGR HQLR H H+ PI+GD K+ + + N ++L LHA + L HP G
Sbjct: 158 TGRKHQLRRHMAHLRHPIIGDTKH-GDLRQNRSLAEHFGCSRLMLHASELSLTHPFTGEP 216
Query: 305 LQITAPL 311
L ITA L
Sbjct: 217 LTITAGL 223