RPSBLAST alignment for GI: 254780608 and conserved domain: cd02558

>gnl|CDD|30015 cd02558, PSRA_1, PSRA_1: Pseudouridine synthase, a subgroup of the RluA family. This group is comprised of bacterial proteins assigned to the RluA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The RluA family is comprised of proteins related to Escherichia coli RluA. . Length = 246

 Score = 74.9 bits (184), Expect = 3e-14
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 38/219 (17%)

Query: 101 LLYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLT--HRLDQETSGIL 158
           +L++D  + V +KP  + V        ++   L   +  +   P LT  HRLD+ T+G++
Sbjct: 41  ILHQDEHLLVADKPHFLPVTPRGR---YVTETLLVRLRRQTGNPDLTPAHRLDRLTAGLV 97

Query: 159 VVAR---TRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANW-------LLKKSHI 208
           + ++   TR A Q L   F  R + K Y            E +A +       L  +S I
Sbjct: 98  LFSKRPETRGAYQTL---FARREVSKTY------------EAVAPYVPALTFPLTVRSRI 142

Query: 209 GGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVG 268
                    +  +G   A +  +++      +    + PHTG+THQLRVH   +G PI+ 
Sbjct: 143 VKGRGFFQAREVEGEPNAETRIELLARR-GGWGLYRLSPHTGKTHQLRVHMAALGVPILN 201

Query: 269 DHKY---CANFKGNFTSPIQNKLYLHARYMDLPHPEGGR 304
           D  Y         +F+ P+Q    L A+ ++   P  GR
Sbjct: 202 DPFYPVLLDKDPDDFSRPLQ----LLAKELEFTDPLTGR 236