RPSBLAST alignment for GI: 254780608 and conserved domain: cd02563

>gnl|CDD|30016 cd02563, PseudoU_synth_TruC, tRNA pseudouridine isomerase C: Pseudouridine synthases catalyze the isomerization of specific uridines in an tRNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. TruC makes psi65 in tRNAs. This psi residue is not universally conserved.. Length = 223
 Score =  107 bits (269), Expect = 5e-24
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 25/229 (10%)

Query: 101 LLYEDSKIYVFNKPAGISVQGGSGIAYHIDGF-LKSWVDSKGQKPRLTHRLDQETSGILV 159
           +LY+D  +   NKP+G+ V   S +  H   F L++  D  GQ     HRLD+ TSG+L+
Sbjct: 3   ILYQDEHLVAINKPSGLLVHR-SELDRHETRFALQTLRDQLGQHVYPVHRLDRPTSGVLL 61

Query: 160 VARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQN 219
            A +   A+ L E F   R+ K Y ++V G              +   +   +      +
Sbjct: 62  FALSSEVARKLGEQFTEHRVHKTYLAVVRGYVPESGTIDYPLSEELDKLADKFA----SD 117

Query: 220 EKGANYAISHFK---------VIDCFAQ-KFCWLEMQPHTGRTHQLRVHALHMGCPIVGD 269
           +K    A +H++         V+  +   ++  +E+ PHTGR HQLR H  H+  PI+GD
Sbjct: 118 DKAPQAATTHYRLLAVEELPVVVGKYPTSRYSLVELTPHTGRKHQLRRHLAHIRHPIIGD 177

Query: 270 HKYCAN-----FKGNFTSPIQNKLYLHARYMDLPHPEGG-RLQITAPLP 312
             +        F+ +F      +L L A  ++  HP  G RL I APL 
Sbjct: 178 TTHGDGRHNRFFREHFGCH---RLLLAATRLEFTHPVTGERLLIEAPLD 223