RPSBLAST alignment of GI: 254780608 and MMDB domain: 1v9f_A_

>1v9f_A (A:) Ribosomal large subunit pseudouridine synthase D; RNA binding, lyase; 1.70A {Escherichia coli}Length = 325
 Score =  117 bits (294), Expect = 2e-27
 Identities = 71/332 (21%), Positives = 128/332 (38%), Gaps = 33/332 (9%)

Query: 10  VVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQVVRIPP 69
             V  ++   RLD+     +P  +   +++ +   +V V+ K          G       
Sbjct: 8   ATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAIN 67

Query: 70  VINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGSGIAYHI 129
                    + Q I                 ++YED  I + NKP  + V  G+G     
Sbjct: 68  AEIEEEARFEPQDI--------------PLDIVYEDEDIIIINKPRDLVVHPGAGNPDGT 113

Query: 130 DGFLKSWV---DSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSL 186
                       +   +  + HRLD++T+G++VVA+T  A   L ES + R I + Y ++
Sbjct: 114 VLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAV 173

Query: 187 VWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQ 246
             G                +      VH           A++H+++++ F        ++
Sbjct: 174 AIGHMTAGGTVDEPISRHPTKRTHMAVHP------MGKPAVTHYRIMEHFRVHTRL-RLR 226

Query: 247 PHTGRTHQLRVHALHMGCPIVGDHKYCANFKGNFTSP--------IQNKLYLHARYMDLP 298
             TGRTHQ+RVH  H+  P+VGD  Y    +    +           ++  LHA  + L 
Sbjct: 227 LETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLY 286

Query: 299 HPEGGR-LQITAPLPAHMVKTWDSLGFKYDRN 329
           HP  G  ++  AP+P  MV+  + +   ++ +
Sbjct: 287 HPISGIEMEWHAPIPQDMVELIEVMRADFEEH 318